Detailed information NTG0483609

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: IC782_RS08655
• Genome accession: NZ_CP061620
• Coordinates: 1808604..1809419 (+)
• Length: 271 a.a.
• NCBI ID: WP_077168510.1
• Uniprot ID: -
• Organism: Acinetobacter seifertii strain AS49
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1803604..1814419

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IC782_RS08620 (IC782_08615)	kdsB	1804129..1804890 (+)	762	WP_049064951.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
IC782_RS08625 (IC782_08620)	-	1804902..1805882 (+)	981	WP_077168508.1	DNA polymerase III subunit delta'	-
IC782_RS08630 (IC782_08625)	-	1805895..1806236 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
IC782_RS08635 (IC782_08630)	-	1806254..1807027 (+)	774	WP_077168509.1	TatD family hydrolase	-
IC782_RS08640 (IC782_08635)	-	1807065..1807673 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
IC782_RS08645 (IC782_08640)	-	1807683..1808234 (+)	552	WP_004701984.1	type II secretion system protein	-
IC782_RS08650 (IC782_08645)	xcpV	1808224..1808604 (+)	381	WP_019458993.1	type II secretion system minor pseudopilin GspI	Machinery gene
IC782_RS08655 (IC782_08650)	xcpW	1808604..1809419 (+)	816	WP_077168510.1	type II secretion system minor pseudopilin GspJ	Machinery gene
IC782_RS08660 (IC782_08655)	gspK	1809419..1810375 (+)	957	WP_077168511.1	type II secretion system minor pseudopilin GspK	-
IC782_RS08665 (IC782_08660)	-	1810605..1811201 (+)	597	WP_077168512.1	6-pyruvoyl trahydropterin synthase family protein	-
IC782_RS08670 (IC782_08665)	ung	1811252..1811965 (+)	714	WP_077168513.1	uracil-DNA glycosylase	-
IC782_RS08675 (IC782_08670)	-	1811962..1813086 (+)	1125	WP_019458997.1	enoyl-CoA hydratase/isomerase family protein	-
IC782_RS08680 (IC782_08675)	tadA	1813094..1813595 (+)	502	Protein_1697	tRNA adenosine(34) deaminase TadA	-
IC782_RS08685 (IC782_08680)	-	1813665..1814105 (+)	441	WP_107973453.1	SRPBCC family protein	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30658.14 Da
• Isoelectric Point: 9.8524

>NTDB_id=483609 IC782_RS08655 WP_077168510.1 1808604..1809419(+) (xcpW) [Acinetobacter seifertii strain AS49]
MIKNKYFHYRSTAAHLAARSGVVSTGYSEHSSSFCAQTKCSFKDPHTRNMVSRLAARSSSVRLTRASGFTLVELLVAIAI
FAVLSLLGWKIFDYLLKVRDRNAVHEVHLFELQDAYQQILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLK
QGLSPFERIEYRYDAEQKKLYRLKYTNLNTSNREQPLSSTLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKG
IKIQLTVAGVSYEWIYSLNQGNLALSQQGGS

Nucleotide

• Length: 816 bp

>NTDB_id=483609 IC782_RS08655 WP_077168510.1 1808604..1809419(+) (xcpW) [Acinetobacter seifertii strain AS49]
ATGATAAAAAATAAATATTTTCACTATCGTAGCACAGCTGCGCATCTTGCGGCACGATCAGGAGTTGTGTCGACTGGCTA
TTCAGAGCATAGCTCTTCGTTTTGCGCTCAGACAAAGTGTAGCTTTAAAGACCCTCACACTCGAAACATGGTTTCTCGTC
TTGCGGCGCGATCGAGCAGTGTTCGATTAACTCGCGCCTCAGGATTTACGTTGGTTGAGTTGTTGGTTGCTATAGCTATC
TTTGCGGTTTTATCTTTATTAGGGTGGAAAATTTTCGATTATCTACTCAAGGTTCGTGATCGCAACGCTGTACATGAAGT
GCATTTATTTGAGTTACAAGACGCTTATCAACAAATCCTTCGTGATACTTTGCAAATTATTCCTCTATCGGCAAATCAGG
GTGGACAACTTCATCCAGCTTTAGAAATCGATAATCAAATTTTGCGTTTTAGCAAAGCAGGGGTAACTGATCCTTTAAAA
CAAGGGCTCTCACCGTTTGAACGAATTGAGTATCGTTATGATGCGGAACAAAAAAAACTATATCGTCTTAAATATACCAA
TTTAAATACTTCGAATAGGGAGCAGCCTTTATCGAGTACCTTGTTAAGTCAAGTTGATCAATACCAAATTATGGTTTTGA
CTCCGCAAGAGGTAACAAAATGGCCCGAGGTTAATATTGATCCAACAAAGCCTAACGAGTTAAAAAAATTACCGAAAGGA
ATAAAAATCCAACTTACAGTAGCGGGAGTAAGTTATGAATGGATCTATAGCTTAAATCAAGGCAACTTGGCCCTTTCTCA
GCAAGGTGGTTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	94.69	83.395	0.79