Detailed information NTG0483348

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: J7U24_RS09810
• Genome accession: NZ_CP072440
• Coordinates: 1863841..1864941 (+)
• Length: 366 a.a.
• NCBI ID: WP_372434694.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain S24730
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1858841..1869941

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7U24_RS09785 (J7U24_09760)	pgsA	1859384..1859926 (-)	543	WP_002947777.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
J7U24_RS09790 (J7U24_09765)	-	1859939..1860796 (-)	858	WP_014608803.1	helix-turn-helix transcriptional regulator	-
J7U24_RS09795 (J7U24_09770)	yfmH	1860855..1862132 (-)	1278	WP_011226704.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
J7U24_RS09800 (J7U24_09775)	yfmF	1862134..1863383 (-)	1250	Protein_1886	EF-P 5-aminopentanol modification-associated protein YfmF	-
J7U24_RS09805 (J7U24_09780)	yaaA	1863461..1863838 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
J7U24_RS09810 (J7U24_09785)	recF	1863841..1864941 (+)	1101	WP_372434694.1	DNA replication/repair protein RecF	Machinery gene
J7U24_RS09815 (J7U24_09790)	guaB	1865110..1866591 (-)	1482	WP_014608806.1	IMP dehydrogenase	-
J7U24_RS09820 (J7U24_09795)	trpS	1866768..1867790 (-)	1023	WP_002952292.1	tryptophan--tRNA ligase	-
J7U24_RS09825 (J7U24_09800)	-	1868218..1869090 (+)	873	WP_011227628.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42233.39 Da
• Isoelectric Point: 8.3913

>NTDB_id=483348 J7U24_RS09810 WP_372434694.1 1863841..1864941(+) (recF) [Streptococcus thermophilus strain S24730]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGFPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=483348 J7U24_RS09810 WP_372434694.1 1863841..1864941(+) (recF) [Streptococcus thermophilus strain S24730]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCACCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATTTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACAGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACGACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.663	100	0.429