Detailed information NTG0048304

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: PSTAA_RS20655
• Genome accession: NC_017532
• Coordinates: 4450317..4451591 (-)
• Length: 424 a.a.
• NCBI ID: WP_043942371.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri DSM 4166
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4445317..4456591

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSTAA_RS20640 (PSTAA_4140)	rpoH	4447666..4448520 (-)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-
PSTAA_RS20645 (PSTAA_4141)	ftsX	4448633..4449652 (-)	1020	WP_011914995.1	permease-like cell division protein FtsX	-
PSTAA_RS20650 (PSTAA_4142)	ftsE	4449652..4450320 (-)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
PSTAA_RS20655 (PSTAA_4143)	pilA	4450317..4451591 (-)	1275	WP_043942371.1	signal recognition particle-docking protein FtsY	Machinery gene
PSTAA_RS20660 (PSTAA_4144)	-	4451819..4453171 (+)	1353	WP_014598016.1	M16 family metallopeptidase	-
PSTAA_RS20665 (PSTAA_4145)	-	4453164..4454705 (+)	1542	WP_014598017.1	M16 family metallopeptidase	-
PSTAA_RS20670 (PSTAA_4146)	rsmD	4454705..4455322 (+)	618	WP_011915000.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
PSTAA_RS20675 (PSTAA_4147)	-	4455316..4455720 (-)	405	WP_043942372.1	hypothetical protein	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 45203.38 Da
• Isoelectric Point: 4.6105

>NTDB_id=48304 PSTAA_RS20655 WP_043942371.1 4450317..4451591(-) (pilA) [Stutzerimonas stutzeri DSM 4166]
MFGSNDDKKTPAEPGEKKGLFGWLRKKAQPASAEQPATEPQADSEPVEQTVANLETPAATPQYEEPHAVEADLQPTEVIE
SPLPDPVPEPEPEPEPEPEPVSAPVVAATSEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETRLL
TADVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAVDASKRPYVILVVGVNGVGKTTTIGKLAK
KLQLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLME
ELKKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGVGE
GIDDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1275 bp

>NTDB_id=48304 PSTAA_RS20655 WP_043942371.1 4450317..4451591(-) (pilA) [Stutzerimonas stutzeri DSM 4166]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GGCTCAGCCCGCTTCGGCAGAGCAGCCCGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATC
TCGAAACGCCTGCCGCAACGCCGCAGTACGAGGAGCCTCACGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCGAG
TCGCCGCTGCCAGACCCTGTACCCGAACCCGAACCCGAACCCGAACCAGAGCCAGAGCCGGTATCTGCCCCGGTCGTTGC
GGCCACGTCGGAAGCGCCGGCCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCAGCGCCAGCATCG
GCGAAGGCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGACGAACTGGAAACCCGCCTGCTG
ACCGCCGACGTTGGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAAGGAGCTGGCCGA
CAGCGGCGCGCTCTATACCGCGCTGCAGGAGGAGCTCGTCGGCCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGGTCGATG
CCAGCAAGCGTCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTGGCCAAG
AAACTGCAACTCGACGGCAAGAAGGTCATGCTCGCCGCCGGTGACACCTTCCGCGCCGCAGCGGTGGAGCAGCTGCAGGT
CTGGGGCGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCTTCGATGCCGTGC
AGGCCGCCAAGGCACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGCCTGCACACCAAGGACAACCTGATGGAA
GAGTTGAAGAAGGTCCGCCGGGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGTGCTCGATGCCGG
TACCGGACAGAACGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGCTGACCAAGCTCG
ACGGCACCGCCAAGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTAGGCGAA
GGTATCGACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCTCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (134-199)

• SRP54-type protein, GTPase domain (SRP54) (219-418)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.761	98.585	0.491