Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSTAA_RS20455 Genome accession   NC_017532
Coordinates   4411171..4411578 (-) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri DSM 4166     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4406171..4416578
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSTAA_RS20435 (PSTAA_4099) - 4406860..4408908 (-) 2049 WP_011914956.1 methyl-accepting chemotaxis protein -
  PSTAA_RS20440 (PSTAA_4100) - 4409070..4410050 (+) 981 WP_014595514.1 IS5-like element ISPst7 family transposase -
  PSTAA_RS20445 (PSTAA_4101) - 4410186..4410719 (-) 534 WP_014597994.1 chemotaxis protein CheW -
  PSTAA_RS20450 (PSTAA_4102) pilH 4410761..4411126 (-) 366 WP_003297216.1 twitching motility response regulator PilH -
  PSTAA_RS20455 (PSTAA_4103) pilG 4411171..4411578 (-) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  PSTAA_RS20460 (PSTAA_4104) gshB 4411815..4412765 (+) 951 WP_014597995.1 glutathione synthase -
  PSTAA_RS20465 (PSTAA_4105) - 4412853..4413746 (+) 894 WP_014597996.1 energy transducer TonB -
  PSTAA_RS20470 (PSTAA_4106) - 4413812..4414381 (+) 570 WP_011914961.1 YqgE/AlgH family protein -
  PSTAA_RS20475 (PSTAA_4107) ruvX 4414378..4414806 (+) 429 WP_014597997.1 Holliday junction resolvase RuvX -
  PSTAA_RS20480 (PSTAA_4108) pyrR 4414824..4415339 (+) 516 WP_014597998.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PSTAA_RS20485 (PSTAA_4109) - 4415393..4416409 (+) 1017 WP_014597999.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=48301 PSTAA_RS20455 WP_003282729.1 4411171..4411578(-) (pilG) [Stutzerimonas stutzeri DSM 4166]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=48301 PSTAA_RS20455 WP_003282729.1 4411171..4411578(-) (pilG) [Stutzerimonas stutzeri DSM 4166]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment