Detailed information NTG0048295

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: PSTAA_RS13790
• Genome accession: NC_017532
• Coordinates: 2947719..2949944 (-)
• Length: 741 a.a.
• NCBI ID: WP_014597107.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri DSM 4166
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2942719..2954944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSTAA_RS13755 (PSTAA_2753)	murB	2943109..2944128 (-)	1020	WP_011913740.1	UDP-N-acetylmuramate dehydrogenase	-
PSTAA_RS13760 (PSTAA_2754)	-	2944125..2944592 (-)	468	WP_014597103.1	low molecular weight protein-tyrosine-phosphatase	-
PSTAA_RS13765 (PSTAA_2755)	kdsB	2944594..2945358 (-)	765	WP_014597104.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PSTAA_RS13770 (PSTAA_2756)	-	2945355..2945540 (-)	186	WP_011913743.1	Trm112 family protein	-
PSTAA_RS13775 (PSTAA_2757)	lpxK	2945586..2946590 (-)	1005	WP_014597105.1	tetraacyldisaccharide 4'-kinase	-
PSTAA_RS13780 (PSTAA_2758)	-	2946590..2947018 (-)	429	WP_013983259.1	ExbD/TolR family protein	-
PSTAA_RS13785 (PSTAA_2759)	-	2947015..2947647 (-)	633	WP_014597106.1	MotA/TolQ/ExbB proton channel family protein	-
PSTAA_RS13790 (PSTAA_2760)	comA	2947719..2949944 (-)	2226	WP_014597107.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
PSTAA_RS13795 (PSTAA_2761)	-	2950089..2950604 (+)	516	WP_014597108.1	DUF2062 domain-containing protein	-
PSTAA_RS13800 (PSTAA_2762)	-	2950617..2951861 (-)	1245	WP_043942333.1	lipoprotein-releasing ABC transporter permease subunit	-
PSTAA_RS13805 (PSTAA_2763)	lolD	2951861..2952559 (-)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
PSTAA_RS13810 (PSTAA_2764)	-	2952567..2953814 (-)	1248	WP_041771782.1	lipoprotein-releasing ABC transporter permease subunit	-
PSTAA_RS13815 (PSTAA_2765)	-	2953847..2954482 (+)	636	WP_014597110.1	PilZ domain-containing protein	-
PSTAA_RS13820 (PSTAA_2766)	-	2954486..2954794 (+)	309	WP_014597111.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80975.57 Da
• Isoelectric Point: 9.9660

>NTDB_id=48295 PSTAA_RS13790 WP_014597107.1 2947719..2949944(-) (comA) [Stutzerimonas stutzeri DSM 4166]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGLFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASTASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRSPWLPWACGLALSGALAYGWLAGFEVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLI
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPISASGPLANLLAVPWVSLTVPF
ALLGTLLLPVAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LLFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREHALLYDAGPKQGDFDTGERVVVPSLRTLGVARLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAERCESGSSWQWNDVRFSLWQWQMARDSNQLSCVLQIEANGERILLTGDIDQA
AERAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVIERLETLDIQAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=48295 PSTAA_RS13790 WP_014597107.1 2947719..2949944(-) (comA) [Stutzerimonas stutzeri DSM 4166]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTGTTTCTGCTGGGCTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGTCCATGGACGGTCGTACGTTCTGGATCGAG
GGACGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGCCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGTTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGACGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTGTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTCGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGAGGTACCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGCGTCCTGCTGATC
GATCCTCTGGTGACATTGCAGCCCGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCCCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGATTGCCGATAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCGTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTGGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCCGCCTGGATTGCAGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTATTGCCG
CTGCTATTCCCGCCTCGTGTGGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTAGGGCAGGGCCTGGCGGT
GCTTGTACGCACTCGCGAGCATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGGCTCGGTTGGATCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACGTTGCGAAAGCGGTAGCAGCTGGCAGTGGAACGATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCTGTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCGGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGCGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGACACC
CACACCCAAGCGTGATCGAGCGGCTCGAGACCCTCGATATCCAGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATA
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.227	96.356	0.648
comA	Ralstonia pseudosolanacearum GMI1000	37.29	100	0.39