Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | PSTAA_RS04755 | Genome accession | NC_017532 |
| Coordinates | 1019104..1019589 (-) | Length | 161 a.a. |
| NCBI ID | WP_014595911.1 | Uniprot ID | - |
| Organism | Stutzerimonas stutzeri DSM 4166 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1014104..1024589
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSTAA_RS04745 (PSTAA_0934) | - | 1017744..1018253 (-) | 510 | WP_014595909.1 | PilX N-terminal domain-containing pilus assembly protein | - |
| PSTAA_RS04750 (PSTAA_0935) | - | 1018259..1019095 (-) | 837 | WP_014595910.1 | PilW family protein | - |
| PSTAA_RS04755 (PSTAA_0936) | pilV | 1019104..1019589 (-) | 486 | WP_014595911.1 | type IV pilus modification protein PilV | Machinery gene |
| PSTAA_RS04760 (PSTAA_0937) | - | 1019622..1020122 (-) | 501 | WP_014595912.1 | GspH/FimT family pseudopilin | - |
| PSTAA_RS22960 | - | 1020242..1020694 (-) | 453 | WP_413788344.1 | GspH/FimT family protein | - |
| PSTAA_RS04765 (PSTAA_0938) | thiO | 1020847..1021938 (+) | 1092 | WP_043942118.1 | glycine oxidase ThiO | - |
| PSTAA_RS04770 (PSTAA_0939) | - | 1022087..1022458 (+) | 372 | WP_014595914.1 | translation initiation factor Sui1 | - |
| PSTAA_RS04775 (PSTAA_0940) | speA | 1022581..1024494 (+) | 1914 | WP_014595915.1 | arginine decarboxylase | - |
Sequence
Protein
Download Length: 161 a.a. Molecular weight: 17074.68 Da Isoelectric Point: 6.2458
>NTDB_id=48282 PSTAA_RS04755 WP_014595911.1 1019104..1019589(-) (pilV) [Stutzerimonas stutzeri DSM 4166]
MIEVLITLLLVCIGVLGMVALQGKTIAYTQDSVQRNVAATLANDLIELMRAKPDGLPATSGFYKAKSDAFPSKPAACAPL
PDTASGQLACWAERAKAALPGASDLLESEFYVCRSKAPGNCTTSGSAVEIQLAWRVKAGECMDSSDTGDNTICRYRLRSQ
L
MIEVLITLLLVCIGVLGMVALQGKTIAYTQDSVQRNVAATLANDLIELMRAKPDGLPATSGFYKAKSDAFPSKPAACAPL
PDTASGQLACWAERAKAALPGASDLLESEFYVCRSKAPGNCTTSGSAVEIQLAWRVKAGECMDSSDTGDNTICRYRLRSQ
L
Nucleotide
Download Length: 486 bp
>NTDB_id=48282 PSTAA_RS04755 WP_014595911.1 1019104..1019589(-) (pilV) [Stutzerimonas stutzeri DSM 4166]
ATGATCGAAGTCCTCATCACCCTGCTATTGGTCTGTATTGGCGTCTTGGGGATGGTCGCCCTGCAGGGTAAGACCATCGC
CTACACGCAGGACTCGGTTCAACGCAATGTAGCCGCGACCCTGGCGAATGACCTTATCGAGTTGATGAGGGCCAAGCCTG
ACGGCTTGCCGGCTACGTCAGGCTTCTATAAGGCCAAGTCGGACGCCTTTCCAAGCAAACCCGCCGCCTGCGCACCACTA
CCGGACACCGCAAGCGGCCAGCTGGCCTGCTGGGCCGAGCGCGCAAAGGCCGCGCTACCCGGCGCTTCGGACCTGCTCGA
GAGTGAATTCTATGTGTGCCGGTCCAAGGCCCCTGGCAATTGCACCACCAGCGGCTCAGCTGTGGAAATACAGTTGGCCT
GGCGGGTCAAGGCTGGTGAATGCATGGACTCCAGCGACACCGGCGACAACACCATTTGCCGCTACCGGCTGCGCAGCCAG
CTCTAG
ATGATCGAAGTCCTCATCACCCTGCTATTGGTCTGTATTGGCGTCTTGGGGATGGTCGCCCTGCAGGGTAAGACCATCGC
CTACACGCAGGACTCGGTTCAACGCAATGTAGCCGCGACCCTGGCGAATGACCTTATCGAGTTGATGAGGGCCAAGCCTG
ACGGCTTGCCGGCTACGTCAGGCTTCTATAAGGCCAAGTCGGACGCCTTTCCAAGCAAACCCGCCGCCTGCGCACCACTA
CCGGACACCGCAAGCGGCCAGCTGGCCTGCTGGGCCGAGCGCGCAAAGGCCGCGCTACCCGGCGCTTCGGACCTGCTCGA
GAGTGAATTCTATGTGTGCCGGTCCAAGGCCCCTGGCAATTGCACCACCAGCGGCTCAGCTGTGGAAATACAGTTGGCCT
GGCGGGTCAAGGCTGGTGAATGCATGGACTCCAGCGACACCGGCGACAACACCATTTGCCGCTACCGGCTGCGCAGCCAG
CTCTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
52.976 |
100 |
0.553 |