Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | PSTAA_RS03855 | Genome accession | NC_017532 |
| Coordinates | 825739..826230 (+) | Length | 163 a.a. |
| NCBI ID | WP_003281797.1 | Uniprot ID | A0A210XTT8 |
| Organism | Stutzerimonas stutzeri DSM 4166 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 820739..831230
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSTAA_RS03845 (PSTAA_0751) | uvrA | 821231..824068 (-) | 2838 | WP_014595781.1 | excinuclease ABC subunit UvrA | - |
| PSTAA_RS03850 (PSTAA_0752) | - | 824199..825566 (+) | 1368 | WP_014595782.1 | MFS transporter | - |
| PSTAA_RS03855 (PSTAA_0753) | ssb | 825739..826230 (+) | 492 | WP_003281797.1 | single-stranded DNA-binding protein | Machinery gene |
| PSTAA_RS03860 (PSTAA_0754) | - | 826241..827125 (+) | 885 | WP_017244908.1 | sugar nucleotide-binding protein | - |
| PSTAA_RS03865 (PSTAA_0755) | - | 827118..828047 (+) | 930 | WP_014595783.1 | NAD-dependent epimerase/dehydratase family protein | - |
| PSTAA_RS03870 (PSTAA_0756) | - | 828118..828804 (-) | 687 | WP_014595784.1 | OmpW/AlkL family protein | - |
| PSTAA_RS03875 (PSTAA_0757) | - | 828990..829775 (+) | 786 | WP_014595785.1 | DUF3450 domain-containing protein | - |
| PSTAA_RS03880 (PSTAA_0758) | - | 829772..831118 (+) | 1347 | WP_014595786.1 | MotA/TolQ/ExbB proton channel family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18314.38 Da Isoelectric Point: 5.9492
>NTDB_id=48281 PSTAA_RS03855 WP_003281797.1 825739..826230(+) (ssb) [Stutzerimonas stutzeri DSM 4166]
MARGVNKVILIGNVGGDPETRYMPNGNAVTNITLATTDSWKDKQTGQLQERTEWHRVVLFGKVAEIAGEYLRKGSQCYIE
GRLQTREWEKDGVKRYTTEIVVDMNGTMQLLGGRGGSSDDAPRQPRPQREPQQAPRQQAQPQQPAARQQPAPDYDSFDDD
IPF
MARGVNKVILIGNVGGDPETRYMPNGNAVTNITLATTDSWKDKQTGQLQERTEWHRVVLFGKVAEIAGEYLRKGSQCYIE
GRLQTREWEKDGVKRYTTEIVVDMNGTMQLLGGRGGSSDDAPRQPRPQREPQQAPRQQAQPQQPAARQQPAPDYDSFDDD
IPF
Nucleotide
Download Length: 492 bp
>NTDB_id=48281 PSTAA_RS03855 WP_003281797.1 825739..826230(+) (ssb) [Stutzerimonas stutzeri DSM 4166]
ATGGCCAGAGGGGTGAACAAAGTCATCTTGATCGGCAATGTCGGCGGCGACCCGGAAACCCGCTACATGCCCAATGGCAA
TGCGGTGACCAACATCACGCTGGCAACCACCGACAGCTGGAAGGACAAGCAGACCGGTCAGCTTCAGGAGCGCACCGAGT
GGCACCGTGTGGTGCTCTTCGGCAAGGTCGCCGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCGCAGTGCTACATCGAA
GGCCGCCTGCAGACTCGCGAGTGGGAAAAGGATGGCGTCAAGCGCTACACCACCGAAATCGTCGTCGACATGAATGGCAC
CATGCAGCTGCTCGGCGGCCGTGGCGGCAGTTCCGATGACGCGCCACGTCAGCCGCGCCCGCAGCGCGAGCCGCAACAGG
CTCCGCGTCAGCAGGCTCAGCCGCAGCAGCCGGCCGCACGGCAGCAGCCAGCGCCGGACTATGACAGCTTCGATGACGAC
ATCCCCTTTTAG
ATGGCCAGAGGGGTGAACAAAGTCATCTTGATCGGCAATGTCGGCGGCGACCCGGAAACCCGCTACATGCCCAATGGCAA
TGCGGTGACCAACATCACGCTGGCAACCACCGACAGCTGGAAGGACAAGCAGACCGGTCAGCTTCAGGAGCGCACCGAGT
GGCACCGTGTGGTGCTCTTCGGCAAGGTCGCCGAGATCGCCGGCGAGTACCTGCGCAAGGGTTCGCAGTGCTACATCGAA
GGCCGCCTGCAGACTCGCGAGTGGGAAAAGGATGGCGTCAAGCGCTACACCACCGAAATCGTCGTCGACATGAATGGCAC
CATGCAGCTGCTCGGCGGCCGTGGCGGCAGTTCCGATGACGCGCCACGTCAGCCGCGCCCGCAGCGCGAGCCGCAACAGG
CTCCGCGTCAGCAGGCTCAGCCGCAGCAGCCGGCCGCACGGCAGCAGCCAGCGCCGGACTATGACAGCTTCGATGACGAC
ATCCCCTTTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
56.571 |
100 |
0.607 |
| ssb | Neisseria gonorrhoeae MS11 |
47.727 |
100 |
0.515 |
| ssb | Glaesserella parasuis strain SC1401 |
45.355 |
100 |
0.509 |
| ssb | Neisseria meningitidis MC58 |
46.591 |
100 |
0.503 |