Detailed information NTG0482725

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: J7T96_RS09765
• Genome accession: NZ_CP072434
• Coordinates: 1853576..1854676 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain S24742
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1848576..1859676

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T96_RS09740 (J7T96_09605)	pgsA	1849119..1849661 (-)	543	WP_002947777.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
J7T96_RS09745 (J7T96_09610)	-	1849674..1850531 (-)	858	WP_014608803.1	helix-turn-helix transcriptional regulator	-
J7T96_RS09750 (J7T96_09615)	yfmH	1850590..1851866 (-)	1277	Protein_1864	EF-P 5-aminopentanol modification-associated protein YfmH	-
J7T96_RS09755 (J7T96_09620)	yfmF	1851868..1853118 (-)	1251	Protein_1865	EF-P 5-aminopentanol modification-associated protein YfmF	-
J7T96_RS09760 (J7T96_09625)	yaaA	1853196..1853573 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
J7T96_RS09765 (J7T96_09630)	recF	1853576..1854676 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
J7T96_RS09770 (J7T96_09635)	guaB	1854845..1856326 (-)	1482	WP_014608806.1	IMP dehydrogenase	-
J7T96_RS09775 (J7T96_09640)	trpS	1856503..1857525 (-)	1023	WP_207559863.1	tryptophan--tRNA ligase	-
J7T96_RS09780 (J7T96_09645)	-	1857953..1858825 (+)	873	WP_011227628.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=482725 J7T96_RS09765 WP_002947786.1 1853576..1854676(+) (recF) [Streptococcus thermophilus strain S24742]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=482725 J7T96_RS09765 WP_002947786.1 1853576..1854676(+) (recF) [Streptococcus thermophilus strain S24742]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCACCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACGGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432