Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | IC805_RS17555 | Genome accession | NZ_CP061472 |
| Coordinates | 3474776..3475849 (+) | Length | 357 a.a. |
| NCBI ID | WP_021322348.1 | Uniprot ID | - |
| Organism | Geobacillus thermoleovorans strain SURF-48B | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3469776..3480849
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC805_RS17530 (IC805_17525) | - | 3470967..3471143 (-) | 177 | WP_011231921.1 | DUF2759 domain-containing protein | - |
| IC805_RS17535 (IC805_17530) | - | 3471313..3471945 (+) | 633 | WP_011231920.1 | MBL fold metallo-hydrolase | - |
| IC805_RS17540 (IC805_17535) | - | 3472267..3473400 (+) | 1134 | WP_020278526.1 | class I SAM-dependent methyltransferase | - |
| IC805_RS17545 (IC805_17540) | - | 3473484..3473726 (-) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| IC805_RS17550 (IC805_17545) | - | 3473885..3474583 (-) | 699 | WP_011231918.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| IC805_RS17555 (IC805_17550) | comGA | 3474776..3475849 (+) | 1074 | WP_021322348.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IC805_RS17560 (IC805_17555) | comGB | 3475846..3476874 (+) | 1029 | WP_014196341.1 | competence type IV pilus assembly protein ComGB | - |
| IC805_RS17565 (IC805_17560) | comGC | 3477077..3477373 (+) | 297 | WP_011231915.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IC805_RS17570 (IC805_17565) | comGD | 3477363..3477800 (+) | 438 | WP_011231914.1 | competence type IV pilus minor pilin ComGD | - |
| IC805_RS17575 (IC805_17570) | - | 3477784..3478110 (+) | 327 | WP_011231913.1 | type II secretion system protein | - |
| IC805_RS17580 (IC805_17575) | comGF | 3478089..3478535 (+) | 447 | WP_014196339.1 | competence type IV pilus minor pilin ComGF | - |
| IC805_RS17585 (IC805_17580) | comGG | 3478610..3478999 (+) | 390 | WP_014196338.1 | competence type IV pilus minor pilin ComGG | - |
| IC805_RS17590 (IC805_17585) | - | 3479046..3479225 (+) | 180 | WP_011231910.1 | YqzE family protein | - |
| IC805_RS17595 (IC805_17590) | - | 3479328..3480122 (-) | 795 | WP_011231909.1 | YqhG family protein | - |
Sequence
Protein
Download Length: 357 a.a. Molecular weight: 39535.99 Da Isoelectric Point: 8.7901
>NTDB_id=482491 IC805_RS17555 WP_021322348.1 3474776..3475849(+) (comGA) [Geobacillus thermoleovorans strain SURF-48B]
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRLSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRLSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
Nucleotide
Download Length: 1074 bp
>NTDB_id=482491 IC805_RS17555 WP_021322348.1 3474776..3475849(+) (comGA) [Geobacillus thermoleovorans strain SURF-48B]
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCCTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCCTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
50.581 |
96.359 |
0.487 |