Detailed information NTG0482429

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: J7T77_RS09610
• Genome accession: NZ_CP072430
• Coordinates: 1837316..1838416 (+)
• Length: 366 a.a.
• NCBI ID: WP_002947786.1
• Uniprot ID: Q5LXI7
• Organism: Streptococcus thermophilus strain S24746
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1832316..1843416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J7T77_RS09585 (J7T77_09480)	pgsA	1832857..1833399 (-)	543	WP_002947777.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
J7T77_RS09590 (J7T77_09485)	-	1833412..1834269 (-)	858	WP_014608803.1	helix-turn-helix transcriptional regulator	-
J7T77_RS09595 (J7T77_09490)	yfmH	1834328..1835606 (-)	1279	Protein_1832	EF-P 5-aminopentanol modification-associated protein YfmH	-
J7T77_RS09600 (J7T77_09495)	yfmF	1835608..1836858 (-)	1251	Protein_1833	EF-P 5-aminopentanol modification-associated protein YfmF	-
J7T77_RS09605 (J7T77_09500)	yaaA	1836936..1837313 (+)	378	WP_002947785.1	S4 domain-containing protein YaaA	-
J7T77_RS09610 (J7T77_09505)	recF	1837316..1838416 (+)	1101	WP_002947786.1	DNA replication/repair protein RecF	Machinery gene
J7T77_RS09615 (J7T77_09510)	guaB	1838585..1840066 (-)	1482	WP_014608806.1	IMP dehydrogenase	-
J7T77_RS09620 (J7T77_09515)	trpS	1840243..1841265 (-)	1023	WP_002952292.1	tryptophan--tRNA ligase	-
J7T77_RS09625 (J7T77_09520)	-	1841693..1842565 (+)	873	WP_011227628.1	YitT family protein	-

Sequence

Protein

• Length: 366 a.a.
• Molecular weight: 42173.29 Da
• Isoelectric Point: 8.3913

>NTDB_id=482429 J7T77_RS09610 WP_002947786.1 1837316..1838416(+) (recF) [Streptococcus thermophilus strain S24746]
MWLEKIDIQHFRNYSEASVSFSPHLNIFLGRNAQGKTNILEAIYFLALTRSHRTHLDKELIQFQQNSLKLNGIVHRHSGN
LPLEINLSNKGRVTKVNYLKQAKLSDYIGHMTVVLFAPEDLQLVKGSPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NAYLKSTDKVDINFLSVLDEQLADFGARVIKHRLEFIKQLEEEADGHHSILSNQIERLKISYESNIPIQNSKDIREAFLT
TLNQNHKRDIFKKNTGVGPHRDDLKFYINDMNASFGSQGQQRSLILSLKMAEIALIKKVTEEFPILLLDDVMSELDNHRQ
LKLLESIDEEVQTFMTTTSLDHLSNLPPNLKTFLVKNGTIYEKQVD

Nucleotide

• Length: 1101 bp

>NTDB_id=482429 J7T77_RS09610 WP_002947786.1 1837316..1838416(+) (recF) [Streptococcus thermophilus strain S24746]
ATGTGGCTTGAAAAAATTGATATTCAACACTTTAGAAATTATTCTGAAGCCTCTGTGAGCTTTTCACCACATCTCAATAT
TTTTCTTGGACGAAATGCCCAAGGAAAAACAAATATTCTTGAAGCTATCTATTTTCTAGCCTTAACACGTAGTCATCGGA
CCCATTTAGACAAGGAACTAATTCAGTTCCAGCAAAATAGTCTTAAACTAAACGGCATCGTGCACCGTCATAGTGGAAAC
CTACCTCTGGAAATCAACTTATCTAATAAGGGACGAGTTACAAAGGTCAACTACCTCAAGCAGGCAAAATTATCTGATTA
TATAGGTCACATGACGGTGGTACTCTTTGCTCCTGAGGATTTACAACTTGTAAAAGGATCTCCAAGTCTAAGACGTAAAT
TTATAGATATTGATTTAGGACAGATTAAGCCTGTTTACCTCTCAGACCTATCAAATTACAATCATGTTCTTAAGCAGCGT
AATGCCTATCTCAAATCTACTGACAAGGTAGACATTAATTTCCTCTCAGTTTTAGATGAACAGCTTGCCGATTTTGGAGC
ACGAGTTATTAAACATAGACTAGAATTTATCAAGCAATTAGAAGAGGAAGCTGATGGACATCATAGTATTCTCTCAAATC
AGATTGAGCGTCTTAAAATTTCCTATGAATCTAACATCCCAATACAAAATAGCAAAGATATTCGAGAAGCATTTTTAACT
ACATTAAACCAGAATCACAAAAGAGATATCTTCAAAAAGAATACCGGTGTTGGTCCACATAGGGATGATTTAAAATTTTA
CATTAATGACATGAACGCATCTTTCGGTAGTCAAGGGCAGCAACGTAGCCTTATTCTTTCATTAAAAATGGCTGAGATTG
CTCTAATTAAAAAAGTGACGGAGGAATTTCCTATTCTTCTCCTTGACGATGTCATGAGTGAACTTGACAATCACCGTCAA
CTTAAATTGCTAGAAAGTATTGATGAAGAGGTCCAAACTTTCATGACTACAACCTCACTCGATCATCTTAGCAACCTACC
ACCCAATTTAAAGACCTTCTTAGTTAAGAATGGTACTATTTATGAAAAGCAAGTCGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q5LXI7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	65.642	97.814	0.642
recF	Bacillus subtilis subsp. subtilis str. 168	42.935	100	0.432