Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | IC806_RS05115 | Genome accession | NZ_CP061471 |
| Coordinates | 1015734..1016807 (-) | Length | 357 a.a. |
| NCBI ID | WP_015375397.1 | Uniprot ID | L7ZU71 |
| Organism | Geobacillus zalihae strain SURF-114 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1010734..1021807
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC806_RS05075 (IC806_05075) | - | 1011476..1012270 (+) | 795 | WP_060787691.1 | YqhG family protein | - |
| IC806_RS05080 (IC806_05080) | - | 1012373..1012552 (-) | 180 | WP_011231910.1 | YqzE family protein | - |
| IC806_RS05085 (IC806_05085) | comGG | 1012598..1012987 (-) | 390 | WP_081132457.1 | competence type IV pilus minor pilin ComGG | - |
| IC806_RS05090 (IC806_05090) | comGF | 1013063..1013551 (-) | 489 | WP_223813726.1 | competence type IV pilus minor pilin ComGF | - |
| IC806_RS05095 (IC806_05095) | - | 1013488..1013814 (-) | 327 | WP_042380986.1 | type II secretion system protein | - |
| IC806_RS05100 (IC806_05100) | comGD | 1013798..1014235 (-) | 438 | WP_033004731.1 | competence type IV pilus minor pilin ComGD | - |
| IC806_RS05105 (IC806_05105) | comGC | 1014225..1014521 (-) | 297 | WP_015375395.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| IC806_RS05110 (IC806_05110) | comGB | 1014709..1015737 (-) | 1029 | WP_060787692.1 | competence type IV pilus assembly protein ComGB | - |
| IC806_RS05115 (IC806_05115) | comGA | 1015734..1016807 (-) | 1074 | WP_015375397.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| IC806_RS05120 (IC806_05120) | - | 1017000..1017698 (+) | 699 | WP_020753839.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| IC806_RS05125 (IC806_05125) | - | 1017854..1018096 (+) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| IC806_RS05130 (IC806_05130) | - | 1018180..1019313 (-) | 1134 | WP_081132472.1 | class I SAM-dependent methyltransferase | - |
| IC806_RS05135 (IC806_05135) | - | 1019633..1020265 (-) | 633 | WP_012820544.1 | MBL fold metallo-hydrolase | - |
| IC806_RS05140 (IC806_05140) | - | 1020434..1020610 (+) | 177 | WP_011231921.1 | DUF2759 domain-containing protein | - |
| IC806_RS05145 (IC806_05145) | - | 1020646..1021806 (-) | 1161 | WP_060787693.1 | M14 family metallocarboxypeptidase | - |
Sequence
Protein
Download Length: 357 a.a. Molecular weight: 39640.10 Da Isoelectric Point: 8.1836
>NTDB_id=482410 IC806_RS05115 WP_015375397.1 1015734..1016807(-) (comGA) [Geobacillus zalihae strain SURF-114]
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGALPKETAERLIVHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRLSLPLRELSLFFHSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIHFLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGEER
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGALPKETAERLIVHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRLSLPLRELSLFFHSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIHFLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGEER
Nucleotide
Download Length: 1074 bp
>NTDB_id=482410 IC806_RS05115 WP_015375397.1 1015734..1016807(-) (comGA) [Geobacillus zalihae strain SURF-114]
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTCCTCGCTGAAGCGGTGCAGCGCCGCGCCTCGGATCTCCACCTCGT
TCCGCGCCGCCGTGATGCCGCCGTTCGTCTTCGGCTCGATGGCATGCTTGTCGACGTTGGCGCTCTTCCGAAAGAAACGG
CGGAACGCCTCATCGTTCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTAGCGGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
ACTTCTGCCGCAGCGCCTCTCGCTGCCGCTTCGCGAACTATCCTTATTCTTCCACTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGACTCGTGCTGTTGACCGGTCCGACGGGGTCAGGAAAAACGACGACCCTGTACACCCTTCTTGAT
CTTTGTCAAGCGGAAAGGCAGCGCAATATCATCACGCTTGAAGATCCAATCGAAAAACAGAACGAACGACTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACGTACGCAGCTGGGTTAAAAGCGGCGCTGCGTCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGACACGGCGGCCATTGCCATCCGTTCAGCATTGAGCGGCCATTTGGTCGTATCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCTGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGTTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GGCGCCGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCCCTGGAGGACGTGATTCATTTTCTCTCCAATGGG
AGAGGGAAGCCCAAGCGCTCTTATATGACGCTCGCTCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTCCG
CATGCTTGAGCTCGTCGGAGGGGAAGAAAGATGA
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTCCTCGCTGAAGCGGTGCAGCGCCGCGCCTCGGATCTCCACCTCGT
TCCGCGCCGCCGTGATGCCGCCGTTCGTCTTCGGCTCGATGGCATGCTTGTCGACGTTGGCGCTCTTCCGAAAGAAACGG
CGGAACGCCTCATCGTTCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTAGCGGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
ACTTCTGCCGCAGCGCCTCTCGCTGCCGCTTCGCGAACTATCCTTATTCTTCCACTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGACTCGTGCTGTTGACCGGTCCGACGGGGTCAGGAAAAACGACGACCCTGTACACCCTTCTTGAT
CTTTGTCAAGCGGAAAGGCAGCGCAATATCATCACGCTTGAAGATCCAATCGAAAAACAGAACGAACGACTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACGTACGCAGCTGGGTTAAAAGCGGCGCTGCGTCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGACACGGCGGCCATTGCCATCCGTTCAGCATTGAGCGGCCATTTGGTCGTATCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCTGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGTTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GGCGCCGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCCCTGGAGGACGTGATTCATTTTCTCTCCAATGGG
AGAGGGAAGCCCAAGCGCTCTTATATGACGCTCGCTCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTCCG
CATGCTTGAGCTCGTCGGAGGGGAAGAAAGATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
50.581 |
96.359 |
0.487 |