Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   J7U22_RS04385 Genome accession   NZ_CP072428
Coordinates   850885..851103 (-) Length   72 a.a.
NCBI ID   WP_011681105.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain S24749     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 845885..856103
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J7U22_RS04350 (J7U22_04375) cas1 846047..847051 (-) 1005 WP_372588895.1 CRISPR-associated endonuclease Cas1 -
  J7U22_RS04355 (J7U22_04380) - 847190..848137 (-) 948 WP_011681109.1 dihydroorotate dehydrogenase -
  J7U22_RS04360 (J7U22_04385) - 848156..848929 (-) 774 WP_011681108.1 dihydroorotate dehydrogenase electron transfer subunit -
  J7U22_RS04365 (J7U22_04390) - 848928..849143 (+) 216 WP_011681107.1 hypothetical protein -
  J7U22_RS04370 (J7U22_04395) - 849200..849748 (-) 549 WP_014608278.1 DJ-1 family glyoxalase III -
  J7U22_RS04375 (J7U22_04400) - 849790..850014 (-) 225 WP_011227180.1 TraX family protein -
  J7U22_RS04380 (J7U22_04405) - 850015..850683 (-) 669 WP_014621543.1 TraX family protein -
  J7U22_RS04385 prx 850885..851103 (-) 219 WP_011681105.1 hypothetical protein Regulator
  J7U22_RS04390 (J7U22_04410) - 851540..851731 (-) 192 WP_011681104.1 hypothetical protein -
  J7U22_RS04395 (J7U22_04415) - 851735..852220 (-) 486 WP_071417453.1 NUDIX hydrolase -
  J7U22_RS04400 (J7U22_04420) - 852526..853482 (-) 957 WP_014727508.1 hypothetical protein -
  J7U22_RS04405 (J7U22_04425) - 853805..855463 (+) 1659 WP_014608275.1 NFACT family protein -

Sequence

Protein


Download         Length: 72 a.a.        Molecular weight: 8147.18 Da        Isoelectric Point: 4.4665

>NTDB_id=482176 J7U22_RS04385 WP_011681105.1 850885..851103(-) (prx) [Streptococcus thermophilus strain S24749]
MNSIGKENNIILTYDEFKEAMDNGFIKGDTVQIVRKNGKIHDYVLDGERVEPHEILSLEKVSDIIKELGGDN

Nucleotide


Download         Length: 219 bp        

>NTDB_id=482176 J7U22_RS04385 WP_011681105.1 850885..851103(-) (prx) [Streptococcus thermophilus strain S24749]
ATGAATAGCATAGGAAAGGAGAATAATATAATACTAACCTATGATGAATTTAAAGAGGCTATGGACAACGGTTTTATTAA
AGGTGATACTGTCCAGATTGTCCGAAAGAATGGTAAGATCCATGACTACGTTTTAGACGGTGAACGAGTTGAGCCACACG
AAATATTGAGCTTAGAAAAGGTATCGGATATAATAAAAGAACTAGGCGGAGACAACTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

58.621

80.556

0.472
  prx Streptococcus pyogenes MGAS8232

57.627

81.944

0.472
  prx Streptococcus pyogenes MGAS315

55.932

81.944

0.458
  prx Streptococcus pyogenes MGAS315

55.172

80.556

0.444
  prx Streptococcus pyogenes MGAS315

73.81

58.333

0.431
  prx Streptococcus pyogenes MGAS315

65.909

61.111

0.403
  prx Streptococcus pyogenes MGAS315

68.293

56.944

0.389