Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   NMBNZ0533_RS10410 Genome accession   NC_017518
Coordinates   2006022..2006666 (-) Length   214 a.a.
NCBI ID   WP_014582479.1    Uniprot ID   -
Organism   Neisseria meningitidis NZ-05/33     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2001022..2011666
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBNZ0533_RS10375 (NMBNZ0533_1837) ftsL 2001392..2001655 (-) 264 WP_002232818.1 cell division protein FtsL -
  NMBNZ0533_RS10380 (NMBNZ0533_1838) rsmH 2001652..2002638 (-) 987 WP_002218781.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  NMBNZ0533_RS10385 (NMBNZ0533_1839) mraZ 2002635..2003090 (-) 456 WP_002218779.1 division/cell wall cluster transcriptional repressor MraZ -
  NMBNZ0533_RS10390 (NMBNZ0533_1840) - 2003396..2004586 (+) 1191 WP_050584727.1 class I SAM-dependent methyltransferase -
  NMBNZ0533_RS10405 (NMBNZ0533_1843) - 2005168..2005989 (-) 822 WP_002226074.1 undecaprenyl-diphosphate phosphatase -
  NMBNZ0533_RS10410 (NMBNZ0533_1844) dsbA1 2006022..2006666 (-) 645 WP_014582479.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMBNZ0533_RS10415 (NMBNZ0533_1845) ftsN 2006669..2007514 (-) 846 WP_014582480.1 cell division protein FtsN -
  NMBNZ0533_RS10420 (NMBNZ0533_1846) comM 2007620..2009116 (-) 1497 WP_014582481.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  NMBNZ0533_RS10425 (NMBNZ0533_1847) - 2009130..2009450 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  NMBNZ0533_RS10435 (NMBNZ0533_1848) putP 2009933..2011459 (+) 1527 WP_002216504.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23868.85 Da        Isoelectric Point: 9.7103

>NTDB_id=48167 NMBNZ0533_RS10410 WP_014582479.1 2006022..2006666(-) (dsbA1) [Neisseria meningitidis NZ-05/33]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=48167 NMBNZ0533_RS10410 WP_014582479.1 2006022..2006666(-) (dsbA1) [Neisseria meningitidis NZ-05/33]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGTAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCTGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATATGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

57.219

87.383

0.5
  dsbA2 Neisseria meningitidis MC58

51.613

86.916

0.449

Multiple sequence alignment