Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   ICJ61_RS06680 Genome accession   NZ_CP061284
Coordinates   1294438..1294629 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus halotolerans strain XH-1     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1289438..1299629
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ICJ61_RS06650 (ICJ61_06655) argF 1290284..1291241 (+) 958 Protein_1264 ornithine carbamoyltransferase -
  ICJ61_RS06655 (ICJ61_06660) - 1291327..1291506 (+) 180 WP_003239319.1 YjzC family protein -
  ICJ61_RS06660 (ICJ61_06665) - 1291552..1291737 (-) 186 WP_010333727.1 YjzD family protein -
  ICJ61_RS06665 (ICJ61_06670) - 1291996..1292733 (+) 738 WP_024120901.1 hypothetical protein -
  ICJ61_RS06670 (ICJ61_06675) - 1292816..1293379 (+) 564 WP_106022355.1 hypothetical protein -
  ICJ61_RS06675 (ICJ61_06680) med 1293470..1294423 (+) 954 WP_024120903.1 BMP family ABC transporter substrate-binding protein Regulator
  ICJ61_RS06680 (ICJ61_06685) comZ 1294438..1294629 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  ICJ61_RS06685 (ICJ61_06690) - 1294659..1294889 (-) 231 WP_081638273.1 hypothetical protein -
  ICJ61_RS06690 (ICJ61_06695) fabH 1295055..1295993 (+) 939 WP_010333732.1 beta-ketoacyl-ACP synthase III -
  ICJ61_RS06695 (ICJ61_06700) fabF 1296016..1297254 (+) 1239 WP_024120905.1 beta-ketoacyl-ACP synthase II -
  ICJ61_RS06700 (ICJ61_06705) - 1297334..1298119 (+) 786 WP_151174924.1 DUF2268 domain-containing protein -
  ICJ61_RS06705 (ICJ61_06710) appD 1298309..1299295 (+) 987 WP_106020547.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=481507 ICJ61_RS06680 WP_003224559.1 1294438..1294629(+) (comZ) [Bacillus halotolerans strain XH-1]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=481507 ICJ61_RS06680 WP_003224559.1 1294438..1294629(+) (comZ) [Bacillus halotolerans strain XH-1]
ATGCAGCACGAAAAATCACTTGAGTTTCTGCAAATAGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTTGAAAAATC
AGGAATAGAGCTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGGCGGAAGCCTATGAGCTGG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1