Detailed information NTG0481506

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: ICJ61_RS06675
• Genome accession: NZ_CP061284
• Coordinates: 1293470..1294423 (+)
• Length: 317 a.a.
• NCBI ID: WP_024120903.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain XH-1
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1288470..1299423

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ICJ61_RS06650 (ICJ61_06655)	argF	1290284..1291241 (+)	958	Protein_1264	ornithine carbamoyltransferase	-
ICJ61_RS06655 (ICJ61_06660)	-	1291327..1291506 (+)	180	WP_003239319.1	YjzC family protein	-
ICJ61_RS06660 (ICJ61_06665)	-	1291552..1291737 (-)	186	WP_010333727.1	YjzD family protein	-
ICJ61_RS06665 (ICJ61_06670)	-	1291996..1292733 (+)	738	WP_024120901.1	hypothetical protein	-
ICJ61_RS06670 (ICJ61_06675)	-	1292816..1293379 (+)	564	WP_106022355.1	hypothetical protein	-
ICJ61_RS06675 (ICJ61_06680)	med	1293470..1294423 (+)	954	WP_024120903.1	BMP family ABC transporter substrate-binding protein	Regulator
ICJ61_RS06680 (ICJ61_06685)	comZ	1294438..1294629 (+)	192	WP_003224559.1	ComG operon transcriptional repressor ComZ	Regulator
ICJ61_RS06685 (ICJ61_06690)	-	1294659..1294889 (-)	231	WP_081638273.1	hypothetical protein	-
ICJ61_RS06690 (ICJ61_06695)	fabH	1295055..1295993 (+)	939	WP_010333732.1	beta-ketoacyl-ACP synthase III	-
ICJ61_RS06695 (ICJ61_06700)	fabF	1296016..1297254 (+)	1239	WP_024120905.1	beta-ketoacyl-ACP synthase II	-
ICJ61_RS06700 (ICJ61_06705)	-	1297334..1298119 (+)	786	WP_151174924.1	DUF2268 domain-containing protein	-
ICJ61_RS06705 (ICJ61_06710)	appD	1298309..1299295 (+)	987	WP_106020547.1	oligopeptide ABC transporter ATP-binding protein AppD	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35285.95 Da
• Isoelectric Point: 4.9707

>NTDB_id=481506 ICJ61_RS06675 WP_024120903.1 1293470..1294423(+) (med) [Bacillus halotolerans strain XH-1]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLFGHGSEYEEVFNLVSEDYPDMQFVISNAKAKADNVTSVHLSGEAIGFFGGMTAAHMSKTNQVGVIASFSWQ
PEVDGFIKGAKYENPNIEVNTKYTDHWDDDSTAVNLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFDKGTLKGGDHYYDLKSRVVEMGTFSPLVDKAFQKKIAKLVKTYNKTGELPKNE

Nucleotide

• Length: 954 bp

>NTDB_id=481506 ICJ61_RS06675 WP_024120903.1 1293470..1294423(+) (med) [Bacillus halotolerans strain XH-1]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCTAAATACAATGTGGACGTCTACTATAAAGAAGGCGTAAAAACAGATGAAGATATTATAAATGCGATTGAAGAT
TTTCATAAGCGCGGCGTCAATCTCCTCTTTGGCCATGGAAGTGAGTATGAAGAAGTATTTAACTTGGTCAGTGAAGACTA
TCCGGATATGCAGTTTGTGATTTCAAATGCAAAAGCAAAAGCGGACAATGTCACAAGCGTCCATCTCAGCGGGGAAGCAA
TCGGCTTTTTCGGCGGAATGACCGCTGCCCATATGTCAAAAACCAATCAGGTCGGCGTCATCGCTTCTTTTTCATGGCAG
CCAGAAGTGGACGGCTTTATAAAAGGGGCTAAGTATGAAAATCCTAATATAGAAGTGAATACAAAATATACGGATCACTG
GGATGATGATTCGACTGCGGTGAACCTTTATCAAAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTATATGCGATCGGCTATGTCACAGATCAATCCGATCTT
GGCGAAAACACCGTGTTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATTATAGCTGAGCAATTCGACAAAGG
GACTTTAAAAGGCGGCGATCACTATTACGATCTGAAAAGCCGAGTTGTCGAAATGGGAACCTTCAGTCCGCTTGTGGACA
AAGCTTTTCAGAAAAAAATCGCCAAACTGGTCAAAACATATAACAAAACAGGTGAACTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	93.375	100	0.934