Detailed information NTG0048115

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SPN994038_RS10820
• Genome accession: NC_021026
• Coordinates: 2010210..2011307 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266660.1
• Uniprot ID: Q97N44
• Organism: Streptococcus pneumoniae SPN994038
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2005210..2016307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPN994038_RS10795 (SPN994038_19560)	pgsA	2005731..2006276 (-)	546	WP_000712141.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SPN994038_RS10800 (SPN994038_19570)	rodZ	2006287..2007108 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
SPN994038_RS10805 (SPN994038_19580)	yfmH	2007150..2008433 (-)	1284	WP_000170216.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SPN994038_RS10810 (SPN994038_19590)	yfmF	2008430..2009680 (-)	1251	WP_000424281.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SPN994038_RS10815 (SPN994038_19600)	yaaA	2009839..2010207 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
SPN994038_RS10820 (SPN994038_19610)	recF	2010210..2011307 (+)	1098	WP_000266660.1	DNA replication/repair protein RecF	Machinery gene
SPN994038_RS10825 (SPN994038_19620)	guaB	2011358..2012836 (-)	1479	WP_000073423.1	IMP dehydrogenase	-
SPN994038_RS10830 (SPN994038_19630)	trpS	2012988..2014013 (-)	1026	WP_000165445.1	tryptophan--tRNA ligase	-
SPN994038_RS10835 (SPN994038_19640)	-	2014219..2015841 (+)	1623	WP_015511338.1	ABC-F family ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41900.00 Da
• Isoelectric Point: 9.0596

>NTDB_id=48115 SPN994038_RS10820 WP_000266660.1 2010210..2011307(+) (recF) [Streptococcus pneumoniae SPN994038]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSAQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=48115 SPN994038_RS10820 WP_000266660.1 2010210..2011307(+) (recF) [Streptococcus pneumoniae SPN994038]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTATTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGCTCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: Q97N44

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46