Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NMBM01240355_RS07810 Genome accession   NC_017517
Coordinates   1515328..1515789 (+) Length   153 a.a.
NCBI ID   WP_014582139.1    Uniprot ID   -
Organism   Neisseria meningitidis M01-240355     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1510328..1520789
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM01240355_RS07785 (NMBM01240355_1405) - 1511455..1511664 (-) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -
  NMBM01240355_RS07790 (NMBM01240355_1406) - 1512009..1512815 (+) 807 WP_002212946.1 DUF4198 domain-containing protein -
  NMBM01240355_RS07795 (NMBM01240355_1407) - 1512873..1514138 (-) 1266 WP_014582137.1 Glu/Leu/Phe/Val dehydrogenase -
  NMBM01240355_RS07805 (NMBM01240355_1408) - 1514545..1515255 (+) 711 WP_014582138.1 phosphoglycolate phosphatase -
  NMBM01240355_RS07810 (NMBM01240355_1409) recX 1515328..1515789 (+) 462 WP_014582139.1 recombination regulator RecX Regulator
  NMBM01240355_RS15770 - 1515863..1516024 (+) 162 WP_002238113.1 hypothetical protein -
  NMBM01240355_RS07825 (NMBM01240355_1410) - 1516177..1516659 (+) 483 WP_002216871.1 acyl-CoA thioesterase -
  NMBM01240355_RS07830 (NMBM01240355_1411) - 1517020..1518267 (-) 1248 WP_014582140.1 M23 family metallopeptidase -
  NMBM01240355_RS07835 (NMBM01240355_1412) surE 1518523..1519269 (-) 747 WP_002225086.1 5'/3'-nucleotidase SurE -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17743.07 Da        Isoelectric Point: 10.0248

>NTDB_id=48115 NMBM01240355_RS07810 WP_014582139.1 1515328..1515789(+) (recX) [Neisseria meningitidis M01-240355]
MKPQKSLRARAMDILSRQEVSRIGLKRKLAPYAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSRNLLPDRSSEKQAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=48115 NMBM01240355_RS07810 WP_014582139.1 1515328..1515789(+) (recX) [Neisseria meningitidis M01-240355]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAAGTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGTACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCCGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACAGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

97.386

100

0.974

Multiple sequence alignment