Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   IB937_RS09260 Genome accession   NZ_CP061132
Coordinates   1839119..1839832 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1834119..1844832
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IB937_RS09250 (IB937_09250) treC 1835188..1836816 (-) 1629 WP_011529089.1 alpha,alpha-phosphotrehalase -
  IB937_RS09255 (IB937_09255) treP 1836884..1838908 (-) 2025 WP_011529090.1 PTS system trehalose-specific EIIBC component -
  IB937_RS09260 (IB937_09260) treR 1839119..1839832 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  IB937_RS09265 (IB937_09265) - 1840111..1840449 (-) 339 WP_011529091.1 winged helix-turn-helix transcriptional regulator -
  IB937_RS09270 (IB937_09270) - 1840635..1841483 (+) 849 Protein_1782 VOC family protein -
  IB937_RS09275 (IB937_09275) yaaA 1841525..1842256 (+) 732 WP_011529093.1 peroxide stress protein YaaA -
  IB937_RS09280 (IB937_09280) nrdG 1842430..1843044 (-) 615 WP_021299115.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  IB937_RS09285 (IB937_09285) - 1843059..1843553 (-) 495 WP_011055085.1 GNAT family N-acetyltransferase -
  IB937_RS09290 (IB937_09290) - 1843562..1844497 (-) 936 WP_021299109.1 Gfo/Idh/MocA family protein -
  IB937_RS09295 (IB937_09295) - 1844526..1844672 (-) 147 WP_011106921.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=480894 IB937_RS09260 WP_002982243.1 1839119..1839832(+) (treR) [Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=480894 IB937_RS09260 WP_002982243.1 1839119..1839832(+) (treR) [Streptococcus pyogenes strain BSAC_bs1388 isolate Invasive disease]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCACTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTTTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679