Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   J5Z97_RS07205 Genome accession   NZ_CP072112
Coordinates   1425363..1426397 (-) Length   344 a.a.
NCBI ID   WP_002994331.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain M08500     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1420363..1431397
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5Z97_RS07170 (J5Z97_07170) - 1421139..1421441 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  J5Z97_RS07175 (J5Z97_07175) - 1421434..1421730 (-) 297 WP_002983486.1 YlxR family protein -
  J5Z97_RS07180 (J5Z97_07180) nusA 1421746..1422903 (-) 1158 WP_023611711.1 transcription termination factor NusA -
  J5Z97_RS07185 (J5Z97_07185) rimP 1423078..1423614 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  J5Z97_RS07195 (J5Z97_07195) trmB 1423873..1424508 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  J5Z97_RS07200 (J5Z97_07200) - 1424508..1425299 (-) 792 WP_002983385.1 phosphotransferase family protein -
  J5Z97_RS07205 (J5Z97_07205) pptB 1425363..1426397 (-) 1035 WP_002994331.1 ABC transporter permease Regulator
  J5Z97_RS07210 (J5Z97_07210) pptA 1426400..1427125 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  J5Z97_RS07215 (J5Z97_07215) - 1427197..1427616 (+) 420 WP_002983376.1 HIT family protein -
  J5Z97_RS07220 (J5Z97_07220) - 1427613..1427969 (+) 357 WP_002983373.1 hypothetical protein -
  J5Z97_RS07225 (J5Z97_07225) - 1428080..1429363 (-) 1284 WP_032467221.1 LCP family protein -
  J5Z97_RS07230 (J5Z97_07230) - 1429372..1429896 (-) 525 WP_002983369.1 N-acetyltransferase -
  J5Z97_RS07235 (J5Z97_07235) tsaE 1429871..1430332 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40242.46 Da        Isoelectric Point: 10.3713

>NTDB_id=480569 J5Z97_RS07205 WP_002994331.1 1425363..1426397(-) (pptB) [Streptococcus pyogenes strain M08500]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=480569 J5Z97_RS07205 WP_002994331.1 1425363..1426397(-) (pptB) [Streptococcus pyogenes strain M08500]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTAATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTATCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43

  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427