Detailed information NTG0480370

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: J5D25_RS03920
• Genome accession: NZ_CP071986
• Coordinates: 822168..823688 (+)
• Length: 506 a.a.
• NCBI ID: WP_209554391.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain MT5124
• Function: interact with DprA (predicted from homology) Homologous recombination

Genomic Context

Location: 817168..828688

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J5D25_RS03890 (J5D25_03890)	moaC	817322..817798 (+)	477	WP_120938377.1	cyclic pyranopterin monophosphate synthase MoaC	-
J5D25_RS03895 (J5D25_03895)	hpaA	817917..818699 (+)	783	WP_209554387.1	HpaA family protein	-
J5D25_RS03900 (J5D25_03900)	-	818721..819557 (+)	837	WP_156562483.1	outer membrane protein	-
J5D25_RS03905 (J5D25_03905)	tig	819670..821025 (+)	1356	WP_209554389.1	trigger factor	-
J5D25_RS03910 (J5D25_03910)	clpP	821046..821633 (+)	588	WP_000540576.1	ATP-dependent Clp endopeptidase proteolytic subunit ClpP	-
J5D25_RS03915 (J5D25_03915)	def	821638..822162 (+)	525	WP_001185854.1	peptide deformylase	-
J5D25_RS03920 (J5D25_03920)	comM	822168..823688 (+)	1521	WP_209554391.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
J5D25_RS03925 (J5D25_03925)	-	823713..825773 (+)	2061	WP_209554393.1	heavy metal translocating P-type ATPase	-
J5D25_RS03930 (J5D25_03930)	-	825815..826015 (+)	201	WP_249936739.1	hypothetical protein	-
J5D25_RS03935 (J5D25_03935)	-	826071..826847 (+)	777	WP_209554395.1	CAAX protease	-
J5D25_RS03940 (J5D25_03940)	-	826835..828061 (+)	1227	WP_209554397.1	restriction endonuclease subunit S	-

Sequence

Protein

• Length: 506 a.a.
• Molecular weight: 57189.17 Da
• Isoelectric Point: 8.3899

>NTDB_id=480370 J5D25_RS03920 WP_209554391.1 822168..823688(+) (comM) [Helicobacter pylori strain MT5124]
MINTIFCATMQRGVAEIVAVEATFTRALPAFVISGLANSSIQEAKQRVQSALQNNDFTFPPLKITINLSPSDLPKSGSHF
DLPIALLVALQKQELAFKEWFAFGELGLDGKIKPNSNIFPMLLDIAIKRPHAKVIVPKANEELFSLIPNLQCFFVEHFKE
ALEILQNPEIKADTHTKKLPFKTIELNDKEYYFSDAYALDFKEVKGQAVAKEAALIASAGFHNLILEGSPGCGKSMIINR
MRYILPPLSLNEILEATKLRILSEQDSAYYPLRSFRNPHQSASKSSILGSSSLREPKPGEIALAHNGMLFFDELPHFKKD
ILEALREPLENNKLVISRVHSKIEYDTSFLFVGAQNPCLCGNLLSATKACRCQDREITQYKNRLSEPFLDRIDLFVQMEE
GNYKDTPSHSWTSKEMHELVLLAFKQQKLRKQSAFNGKLNEEQIERFCPLNTEAQKLLEQAVERFNLSMRSVNKVKKVAR
TIADLNACENIEKSHMLKALSFRKIS

Nucleotide

• Length: 1521 bp

>NTDB_id=480370 J5D25_RS03920 WP_209554391.1 822168..823688(+) (comM) [Helicobacter pylori strain MT5124]
ATGATCAACACGATATTTTGCGCGACCATGCAAAGGGGGGTGGCAGAAATCGTGGCTGTGGAGGCGACTTTCACAAGGGC
TTTGCCGGCGTTTGTGATTTCAGGCTTGGCTAATAGCTCTATCCAAGAAGCCAAACAGCGGGTCCAATCGGCTTTACAAA
ATAACGATTTCACTTTCCCGCCTTTAAAAATCACCATCAACCTTTCCCCCTCAGATTTGCCTAAATCCGGGAGCCATTTT
GATTTGCCTATCGCTCTTTTAGTCGCTTTGCAAAAACAAGAGTTGGCTTTTAAAGAGTGGTTTGCTTTTGGGGAGTTAGG
GCTTGATGGCAAGATCAAACCCAATTCTAACATTTTCCCCATGCTTTTAGACATTGCCATTAAGCGCCCCCATGCTAAAG
TCATTGTGCCTAAGGCGAATGAAGAGCTTTTTTCGCTTATCCCTAATTTGCAATGCTTTTTTGTGGAGCATTTTAAAGAA
GCGTTAGAAATCTTGCAAAACCCTGAAATCAAAGCAGACACCCACACGAAAAAACTACCCTTTAAAACGATAGAATTGAA
CGATAAAGAGTATTATTTTTCAGACGCCTACGCCTTAGATTTTAAAGAAGTTAAGGGGCAAGCTGTCGCTAAAGAAGCCG
CTTTGATCGCTAGTGCTGGGTTTCATAACTTGATTTTAGAGGGAAGTCCAGGGTGCGGGAAAAGCATGATCATTAATCGC
ATGCGTTATATCTTGCCTCCCTTAAGCCTGAATGAAATCCTAGAAGCGACAAAATTACGCATTTTAAGCGAGCAAGACAG
CGCCTATTACCCTTTAAGGAGTTTTAGAAACCCCCACCAGAGCGCTTCAAAATCCAGCATTTTAGGCTCAAGCTCTCTAA
GAGAGCCAAAACCCGGCGAAATCGCGCTAGCGCATAACGGCATGCTTTTTTTTGATGAATTGCCTCATTTTAAAAAGGAT
ATTTTGGAAGCTTTAAGAGAGCCTTTAGAAAACAATAAATTAGTGATCTCAAGAGTGCATAGCAAGATTGAATACGACAC
CTCTTTTTTATTCGTGGGGGCTCAAAACCCTTGCTTATGCGGGAATTTACTCAGCGCCACCAAAGCATGCCGTTGCCAAG
ACAGAGAAATCACGCAGTATAAAAACCGCTTGAGCGAGCCTTTTTTGGATAGGATTGATTTGTTTGTGCAAATGGAAGAG
GGGAATTATAAAGACACGCCGTCGCATTCTTGGACTTCAAAAGAGATGCATGAATTAGTGTTATTAGCTTTCAAACAGCA
AAAGTTAAGGAAGCAGAGCGCTTTTAATGGTAAGCTTAACGAAGAGCAGATCGAACGATTTTGCCCTTTAAATACTGAAG
CGCAAAAGTTGTTAGAGCAGGCGGTTGAAAGGTTTAATTTGTCCATGCGCTCTGTCAATAAGGTCAAAAAGGTCGCTAGG
ACGATTGCGGATTTAAACGCTTGCGAGAATATAGAAAAATCTCACATGCTTAAAGCGTTGAGTTTTAGAAAGATTTCTTA
A

Domains

Predicted by InterProScan.

• Magnesium chelatase, subunit ChlI (Mg_chelatase) (200-403)

• Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C) (412-503)

• Subunit ChlI of Mg-chelatase (ChlI) (20-140)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Helicobacter pylori 26695	97.036	100	0.97
comM	Legionella pneumophila str. Paris	36.581	99.407	0.364
comM	Legionella pneumophila strain ERS1305867	36.581	99.407	0.364
comM	Acinetobacter baylyi ADP1	36.008	100	0.364