Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   IBL27_RS07815 Genome accession   NZ_CP061071
Coordinates   1598752..1599477 (-) Length   241 a.a.
NCBI ID   WP_002262608.1    Uniprot ID   A0AAX1K0Q1
Organism   Streptococcus mutans B04Sm5     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1593752..1604477
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IBL27_RS07780 (IBL27_07780) rnpM 1593923..1594219 (-) 297 WP_002309431.1 RNase P modulator RnpM -
  IBL27_RS07785 (IBL27_07785) nusA 1594237..1595430 (-) 1194 WP_002309437.1 transcription termination factor NusA -
  IBL27_RS07790 (IBL27_07790) rimP 1595466..1595957 (-) 492 WP_002267543.1 ribosome maturation factor RimP -
  IBL27_RS07800 (IBL27_07800) trmB 1596229..1596864 (-) 636 WP_002262605.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  IBL27_RS07805 (IBL27_07805) ccrZ 1596874..1597656 (-) 783 WP_002262606.1 cell cycle regulator CcrZ -
  IBL27_RS07810 (IBL27_07810) pptB 1597715..1598749 (-) 1035 WP_002309440.1 ABC transporter permease Regulator
  IBL27_RS07815 (IBL27_07815) pptA 1598752..1599477 (-) 726 WP_002262608.1 ABC transporter ATP-binding protein Regulator
  IBL27_RS07820 (IBL27_07820) - 1599542..1599961 (+) 420 WP_002262609.1 HIT family protein -
  IBL27_RS07825 (IBL27_07825) - 1599958..1600251 (+) 294 WP_002265649.1 hypothetical protein -
  IBL27_RS07830 (IBL27_07830) brpA 1600421..1601641 (-) 1221 WP_002270523.1 biofilm formation/cell division transcriptional regulator BrpA -
  IBL27_RS07835 (IBL27_07835) tsaE 1601971..1602414 (-) 444 WP_002278621.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  IBL27_RS07840 (IBL27_07840) - 1602542..1603972 (-) 1431 WP_024784385.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26686.26 Da        Isoelectric Point: 4.9888

>NTDB_id=480267 IBL27_RS07815 WP_002262608.1 1598752..1599477(-) (pptA) [Streptococcus mutans B04Sm5]
MLKIENLTGGYVNIPVLKNISFEVADGELVGLIGLNGAGKSTTINEIIGLLQPYEGKISIDGLTLADQEMAYRKKIGFIP
ETPSLYEELTLKEHLEMIAMAYDIKVEAALARAQKLLELFRLEDKLDWFPIHFSKGMKQKVMIICAFIIDPSLFIVDEPF
LGLDPVAISDLTQLLAAEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGSLADLRMTFGNAQASLNDIYMTLTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=480267 IBL27_RS07815 WP_002262608.1 1598752..1599477(-) (pptA) [Streptococcus mutans B04Sm5]
ATGTTAAAAATAGAAAATTTGACCGGTGGTTACGTCAACATTCCTGTCTTGAAAAATATCAGTTTTGAGGTTGCTGATGG
TGAGTTGGTCGGGCTCATAGGCCTCAATGGTGCAGGAAAATCAACAACTATCAATGAAATTATTGGACTTTTGCAGCCTT
ATGAAGGCAAAATCAGTATTGATGGACTGACGCTTGCAGATCAAGAAATGGCTTATCGAAAGAAAATTGGGTTTATTCCA
GAAACACCTAGCCTTTACGAAGAATTAACCTTAAAAGAGCACTTGGAGATGATAGCCATGGCTTATGATATTAAAGTGGA
AGCAGCTTTGGCGCGTGCGCAAAAACTGCTGGAACTTTTTAGATTAGAAGATAAACTGGATTGGTTTCCTATTCATTTTT
CCAAAGGAATGAAACAAAAGGTCATGATTATCTGTGCTTTTATCATTGATCCGAGTCTTTTTATTGTTGATGAGCCTTTC
TTGGGATTGGATCCTGTTGCCATTTCAGATTTGACTCAGCTTTTGGCAGCAGAAAAGGCTAAGGGAAAATCCATTTTGAT
GTCAACTCATGTTTTGGATTCTGCTGAAAAGATGTGTGATCGCTTTGTTATTTTACATCATGGACAAATCCGAGCTCAAG
GAAGTCTCGCTGATTTACGAATGACTTTTGGAAATGCACAAGCCAGCCTTAACGATATCTATATGACTTTGACTAAAGAG
GGTTGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

76.987

99.17

0.763
  pptA Streptococcus salivarius strain HSISS4

76.569

99.17

0.759