Detailed information
Bioinformatically predicted
Overview
| Name | rcrR | Type | Regulator |
| Locus tag | IBL27_RS05635 | Genome accession | NZ_CP061071 |
| Coordinates | 1129521..1129955 (-) | Length | 144 a.a. |
| NCBI ID | WP_002263292.1 | Uniprot ID | A0AAX1K4B8 |
| Organism | Streptococcus mutans B04Sm5 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1125971..1160051 | 1129521..1129955 | within | 0 |
Gene organization within MGE regions
Location: 1125971..1160051
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IBL27_RS05625 (IBL27_05625) | rcrQ | 1125971..1127725 (-) | 1755 | WP_024784423.1 | ABC transporter ATP-binding protein | Regulator |
| IBL27_RS05630 (IBL27_05630) | rcrP | 1127715..1129517 (-) | 1803 | WP_019806057.1 | ABC transporter ATP-binding protein | Regulator |
| IBL27_RS05635 (IBL27_05635) | rcrR | 1129521..1129955 (-) | 435 | WP_002263292.1 | MarR family winged helix-turn-helix transcriptional regulator | Regulator |
| IBL27_RS05640 (IBL27_05640) | queC | 1130507..1131160 (+) | 654 | WP_002309517.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| IBL27_RS05645 (IBL27_05645) | queD | 1131160..1131606 (+) | 447 | WP_002266457.1 | 6-carboxytetrahydropterin synthase QueD | - |
| IBL27_RS05650 (IBL27_05650) | queE | 1131603..1132319 (+) | 717 | WP_002263289.1 | 7-carboxy-7-deazaguanine synthase QueE | - |
| IBL27_RS05655 (IBL27_05655) | queF | 1132332..1132820 (+) | 489 | WP_002265143.1 | preQ(1) synthase | - |
| IBL27_RS05660 (IBL27_05660) | - | 1132929..1133312 (+) | 384 | WP_002270896.1 | DUF3021 family protein | - |
| IBL27_RS05665 (IBL27_05665) | gdhA | 1133422..1134771 (-) | 1350 | WP_002263849.1 | NADP-specific glutamate dehydrogenase | - |
| IBL27_RS05670 (IBL27_05670) | - | 1135533..1136039 (+) | 507 | WP_002308000.1 | DUF308 domain-containing protein | - |
| IBL27_RS05675 (IBL27_05675) | gtfD | 1136263..1140651 (-) | 4389 | WP_002307999.1 | glucosyltransferase-S | - |
| IBL27_RS05680 (IBL27_05680) | - | 1140871..1141791 (-) | 921 | WP_002269023.1 | AEC family transporter | - |
| IBL27_RS05685 (IBL27_05685) | - | 1141907..1143679 (-) | 1773 | WP_002283302.1 | ABC transporter ATP-binding protein | - |
| IBL27_RS05690 (IBL27_05690) | - | 1143690..1145426 (-) | 1737 | WP_024784361.1 | ABC transporter ATP-binding protein | - |
| IBL27_RS05695 (IBL27_05695) | - | 1145882..1147750 (-) | 1869 | WP_002307997.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| IBL27_RS05700 (IBL27_05700) | - | 1147753..1148958 (-) | 1206 | WP_002307996.1 | CCA tRNA nucleotidyltransferase | - |
| IBL27_RS05705 (IBL27_05705) | dapB | 1148955..1149722 (-) | 768 | WP_002307995.1 | 4-hydroxy-tetrahydrodipicolinate reductase | - |
| IBL27_RS05710 (IBL27_05710) | - | 1149734..1150579 (-) | 846 | WP_002311096.1 | DegV family protein | - |
| IBL27_RS05715 (IBL27_05715) | - | 1150585..1150959 (-) | 375 | WP_002262891.1 | DUF1149 family protein | - |
| IBL27_RS05720 (IBL27_05720) | - | 1151068..1152609 (-) | 1542 | WP_002307992.1 | hypothetical protein | - |
| IBL27_RS05725 (IBL27_05725) | - | 1152596..1153312 (-) | 717 | WP_002265102.1 | ABC transporter ATP-binding protein | - |
| IBL27_RS05730 (IBL27_05730) | - | 1153387..1153992 (-) | 606 | WP_002265101.1 | TetR/AcrR family transcriptional regulator | - |
| IBL27_RS05735 (IBL27_05735) | - | 1154156..1154659 (-) | 504 | WP_002266538.1 | phosphatase PAP2 family protein | - |
| IBL27_RS05740 (IBL27_05740) | - | 1154902..1155981 (-) | 1080 | WP_002262882.1 | serine hydrolase domain-containing protein | - |
| IBL27_RS05745 (IBL27_05745) | galE | 1156249..1157250 (-) | 1002 | WP_002262881.1 | UDP-glucose 4-epimerase GalE | - |
| IBL27_RS05750 (IBL27_05750) | galT | 1157399..1158874 (-) | 1476 | WP_002307989.1 | UDP-glucose--hexose-1-phosphate uridylyltransferase | - |
| IBL27_RS05755 (IBL27_05755) | - | 1158879..1160051 (-) | 1173 | WP_002271493.1 | galactokinase | - |
Sequence
Protein
Download Length: 144 a.a. Molecular weight: 16720.58 Da Isoelectric Point: 10.5126
>NTDB_id=480254 IBL27_RS05635 WP_002263292.1 1129521..1129955(-) (rcrR) [Streptococcus mutans B04Sm5]
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE
MKEPFSEFKNLITATERYIQELSKSHGVEHLSGPQGWTVMFLKDNQGKEIFIKDIEKRLDISKSVTSNLIKRMEKNGFIS
VIPSRKDRRYKQIVLTPLGQEKAGKITVFLTDLKKLLLKDISQEDLSVARKVFKQIKQNLEKKE
Nucleotide
Download Length: 435 bp
>NTDB_id=480254 IBL27_RS05635 WP_002263292.1 1129521..1129955(-) (rcrR) [Streptococcus mutans B04Sm5]
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTATCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGAAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA
ATGAAGGAGCCTTTTAGTGAATTTAAAAACCTCATTACAGCAACAGAAAGATATATTCAAGAATTATCCAAAAGCCATGG
TGTTGAACATCTATCCGGACCTCAGGGATGGACAGTTATGTTTTTAAAGGATAATCAAGGAAAGGAAATTTTTATTAAAG
ATATTGAAAAAAGGTTAGATATCTCAAAATCTGTGACCAGTAATCTCATTAAACGAATGGAAAAAAATGGTTTTATTTCT
GTTATTCCTTCCAGAAAAGACAGACGATACAAGCAAATTGTTTTAACGCCATTAGGTCAGGAAAAAGCTGGAAAAATAAC
TGTTTTTTTAACAGATCTTAAAAAGTTGCTTCTAAAAGATATTAGTCAGGAAGACTTATCAGTTGCTCGAAAGGTTTTTA
AACAAATCAAACAAAATTTAGAAAAGAAGGAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrR | Streptococcus mutans UA159 |
100 |
100 |
1 |