Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   IBL27_RS03160 Genome accession   NZ_CP061071
Coordinates   607385..608188 (+) Length   267 a.a.
NCBI ID   WP_002308039.1    Uniprot ID   -
Organism   Streptococcus mutans B04Sm5     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 602385..613188
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  IBL27_RS03135 (IBL27_03135) - 602670..603374 (-) 705 WP_002262933.1 amino acid ABC transporter permease -
  IBL27_RS03140 (IBL27_03140) - 603392..604204 (-) 813 WP_002262932.1 transporter substrate-binding domain-containing protein -
  IBL27_RS03145 (IBL27_03145) - 604201..604983 (-) 783 WP_024784364.1 amino acid ABC transporter ATP-binding protein -
  IBL27_RS03150 (IBL27_03150) vicR 605336..606043 (+) 708 WP_002262930.1 response regulator YycF Regulator
  IBL27_RS03155 (IBL27_03155) vicK 606036..607388 (+) 1353 WP_002264821.1 cell wall metabolism sensor histidine kinase VicK Regulator
  IBL27_RS03160 (IBL27_03160) vicX 607385..608188 (+) 804 WP_002308039.1 MBL fold metallo-hydrolase Regulator
  IBL27_RS03165 (IBL27_03165) rnc 608295..608990 (+) 696 WP_002308038.1 ribonuclease III -
  IBL27_RS03170 (IBL27_03170) smc 608990..612526 (+) 3537 WP_019806106.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29708.74 Da        Isoelectric Point: 6.1184

>NTDB_id=480243 IBL27_RS03160 WP_002308039.1 607385..608188(+) (vicX) [Streptococcus mutans B04Sm5]
MTETGFRYSILASGSSGNSFYLETPQKRILIDAGLSGKKINQLMAEIDRKVDDVDAILVTHEHKDHIHGVGVLARKYGLD
VYANAATWQAMDGMIGKIDVSQKHIFDLGKTITFGDIDIESFGVSHDAAQPQFYRLMKDGKSFVILTDTGYVSDRMADLI
ENADGYLIESNHDIEILRSGTYPWSLKQRILSDKGHLSNDDGAETMVRTLGNKTKKIYLGHLSKENNVKELAHMTMKNAL
MQADLAVDHDFKIYDTSPDTALPLAKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=480243 IBL27_RS03160 WP_002308039.1 607385..608188(+) (vicX) [Streptococcus mutans B04Sm5]
ATGACAGAAACAGGTTTTAGATACAGCATTCTGGCTTCTGGTTCAAGTGGCAATAGTTTTTATTTGGAAACTCCTCAAAA
GAGAATTTTAATTGACGCAGGCCTCTCAGGTAAGAAAATTAATCAATTAATGGCAGAAATAGACCGAAAAGTAGATGATG
TTGATGCCATTTTAGTAACACATGAACATAAAGATCATATTCACGGTGTTGGTGTACTAGCTCGGAAATATGGTTTGGAT
GTCTATGCGAATGCAGCAACATGGCAAGCTATGGATGGCATGATTGGTAAAATTGATGTCAGCCAAAAACATATCTTTGA
TCTGGGGAAAACTATCACTTTTGGGGATATTGATATTGAAAGTTTTGGTGTCAGCCATGATGCTGCTCAACCACAGTTTT
ACCGCCTGATGAAAGACGGCAAGAGTTTTGTCATATTGACGGATACAGGTTATGTCAGTGATCGTATGGCAGATCTGATT
GAAAATGCTGATGGTTATCTGATTGAGTCCAATCATGATATTGAAATTTTACGCTCAGGTACCTACCCTTGGAGTTTAAA
ACAGCGTATTTTATCCGATAAAGGACACCTATCAAATGATGATGGTGCAGAAACAATGGTTCGAACTTTGGGGAATAAAA
CAAAAAAGATTTATTTGGGACATCTCAGCAAAGAAAACAATGTCAAAGAATTAGCCCATATGACGATGAAGAATGCTCTC
ATGCAGGCAGATTTGGCTGTAGATCATGATTTTAAGATTTATGATACCTCGCCAGATACTGCTTTACCATTAGCAAAAAT
CTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

99.251

100

0.993