Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   NMBM04240196_RS09605 Genome accession   NC_017515
Coordinates   1846267..1848309 (-) Length   680 a.a.
NCBI ID   WP_014581543.1    Uniprot ID   -
Organism   Neisseria meningitidis M04-240196     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
ICE 1809313..1865322 1846267..1848309 within 0


Gene organization within MGE regions


Location: 1809313..1865322
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM04240196_RS09475 (NMBM04240196_1698) - 1811896..1812297 (-) 402 WP_014581538.1 toxin-activating lysine-acyltransferase -
  NMBM04240196_RS09480 (NMBM04240196_1699) - 1812463..1812777 (-) 315 WP_002225624.1 hypothetical protein -
  NMBM04240196_RS09485 (NMBM04240196_1700) - 1812789..1813097 (-) 309 WP_002233812.1 hypothetical protein -
  NMBM04240196_RS09490 (NMBM04240196_1701) - 1813069..1814124 (-) 1056 Protein_1750 hypothetical protein -
  NMBM04240196_RS09495 (NMBM04240196_1702) - 1814151..1814567 (-) 417 WP_002224040.1 hypothetical protein -
  NMBM04240196_RS09500 (NMBM04240196_1703) - 1814571..1822114 (-) 7544 Protein_1752 hemagglutinin repeat-containing protein -
  NMBM04240196_RS13165 - 1822270..1822422 (+) 153 Protein_1753 transposase -
  NMBM04240196_RS09505 (NMBM04240196_1704) - 1822693..1823658 (+) 966 WP_002217985.1 IS30-like element IS1655 family transposase -
  NMBM04240196_RS09510 (NMBM04240196_1705) - 1823722..1824210 (-) 489 WP_002232967.1 hypothetical protein -
  NMBM04240196_RS09520 (NMBM04240196_1706) - 1824995..1825930 (-) 936 WP_002246836.1 immunity 49 family protein -
  NMBM04240196_RS09525 (NMBM04240196_1707) - 1825933..1828467 (-) 2535 WP_014581539.1 DUF637 domain-containing protein -
  NMBM04240196_RS09530 (NMBM04240196_1708) - 1828826..1829200 (-) 375 WP_002214443.1 DUF596 domain-containing protein -
  NMBM04240196_RS09535 (NMBM04240196_1709) - 1829219..1831135 (-) 1917 Protein_1759 DUF637 domain-containing protein -
  NMBM04240196_RS09540 (NMBM04240196_1710) - 1831369..1831878 (-) 510 WP_002219760.1 hypothetical protein -
  NMBM04240196_RS09545 (NMBM04240196_1711) hrpA 1831885..1837812 (-) 5928 WP_014581541.1 two-partner secretion exoprotein HrpA -
  NMBM04240196_RS09550 (NMBM04240196_1712) hrpB 1837922..1839664 (-) 1743 WP_014581542.1 two-partner secretion system transporter HrpB -
  NMBM04240196_RS13180 - 1839725..1839964 (-) 240 WP_002236088.1 cysteine peptidase family C39 domain-containing protein -
  NMBM04240196_RS09560 (NMBM04240196_1715) - 1840248..1840550 (-) 303 WP_002221436.1 hypothetical protein -
  NMBM04240196_RS15835 - 1840916..1841304 (-) 389 Protein_1765 hypothetical protein -
  NMBM04240196_RS13185 (NMBM04240196_1717) - 1841704..1842063 (-) 360 WP_002222933.1 hypothetical protein -
  NMBM04240196_RS15600 - 1842268..1842474 (-) 207 WP_002249064.1 hypothetical protein -
  NMBM04240196_RS13190 (NMBM04240196_1719) - 1842483..1843631 (-) 1149 Protein_1768 cupin domain-containing protein -
  NMBM04240196_RS09595 (NMBM04240196_1720) - 1843883..1844164 (+) 282 WP_002222936.1 hypothetical protein -
  NMBM04240196_RS09600 (NMBM04240196_1721) argC 1844161..1845204 (+) 1044 WP_002222937.1 N-acetyl-gamma-glutamyl-phosphate reductase -
  NMBM04240196_RS09605 (NMBM04240196_1722) recG 1846267..1848309 (-) 2043 WP_014581543.1 ATP-dependent DNA helicase RecG Machinery gene
  NMBM04240196_RS09610 (NMBM04240196_1723) secB 1848395..1848838 (-) 444 WP_002214461.1 protein-export chaperone SecB -
  NMBM04240196_RS09615 (NMBM04240196_1724) grxC 1848859..1849116 (-) 258 WP_002221441.1 glutaredoxin 3 -
  NMBM04240196_RS09620 (NMBM04240196_1725) rng 1849329..1850822 (+) 1494 WP_002214463.1 ribonuclease G -
  NMBM04240196_RS09625 (NMBM04240196_1726) - 1850856..1852106 (-) 1251 WP_002222939.1 ATP-binding protein -
  NMBM04240196_RS09630 (NMBM04240196_1727) - 1852102..1852277 (-) 176 Protein_1776 response regulator -
  NMBM04240196_RS09635 (NMBM04240196_1728) - 1852500..1853813 (-) 1314 WP_002222940.1 CitMHS family transporter -
  NMBM04240196_RS09645 (NMBM04240196_1729) - 1854383..1854949 (-) 567 WP_002222966.1 NADPH-dependent FMN reductase -
  NMBM04240196_RS09650 (NMBM04240196_1730) dacB 1855114..1856523 (+) 1410 WP_002222967.1 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase -
  NMBM04240196_RS13200 - 1856570..1857214 (-) 645 Protein_1780 IS1595 family transposase -
  NMBM04240196_RS09660 (NMBM04240196_1731) - 1857467..1858474 (-) 1008 WP_002227613.1 IS5 family transposase -
  NMBM04240196_RS09665 (NMBM04240196_1732) - 1858515..1859042 (+) 528 WP_014581544.1 hypothetical protein -
  NMBM04240196_RS09670 (NMBM04240196_1733) - 1859053..1860060 (+) 1008 WP_002227574.1 IS5 family transposase -
  NMBM04240196_RS09675 (NMBM04240196_1734) - 1860258..1860578 (+) 321 WP_238523994.1 hypothetical protein -
  NMBM04240196_RS09680 (NMBM04240196_1736) - 1860848..1862110 (-) 1263 WP_002214479.1 HlyD family efflux transporter periplasmic adaptor subunit -
  NMBM04240196_RS09685 (NMBM04240196_1737) - 1862112..1864208 (-) 2097 WP_002248022.1 peptidase domain-containing ABC transporter -
  NMBM04240196_RS13210 - 1864243..1864578 (-) 336 WP_002261717.1 hypothetical protein -
  NMBM04240196_RS13215 (NMBM04240196_1738) - 1864602..1864808 (-) 207 WP_002220746.1 hypothetical protein -

Sequence

Protein


Download         Length: 680 a.a.        Molecular weight: 74857.95 Da        Isoelectric Point: 7.8829

>NTDB_id=48018 NMBM04240196_RS09605 WP_014581543.1 1846267..1848309(-) (recG) [Neisseria meningitidis M04-240196]
MMSPETQKQLKITDVSAKKLDKLNLHTAWDLVLHLPLRYEDETHIMPIKDAPIGVPCQVEGEVIHQEVTFKPRKQLIVQI
ADGSGSVLFLRFIHFYASHQKQTAVGKRIRAVGEIKHGFYGDEMIHPKIRDAEGGGLAESLTPVYPTVNGLNQPTLRRII
QTALDVTPLHDTLPDALLCRLKLPHLAESLRLLHLPPPSFTIHQLSDGTLPAWQRLKFDELLAQQLSMRLARQKRIGGTA
AALGGDGTLTQALRQALPFALTDAQEKVVSEICRDMAQTYPMHRLLQGDVGSGKTIVAALSALTAIESGAQVAVMAPTEI
LAEQHFIKFKQWLEPLGIEVVRLFGSLRKKAKDEAKAKLADGSVKIAVGTHALFSDGVAFHNLGLTIVDEQHRFGVAQRL
ALKNKGREVHQLMMSATPIPRTLAMSFFADLDVSVIDELPPGRTPIKTRLVNNVRRAEVEGFVLGTCRKGRQAYWVCPLI
EESETLQLQTAAETLARLQTALPELNIGLVHGRMKAAEKAEVMARFSSGGLNVLVATTVIEVGVDVPNAALMVIEHAERM
GLAQLHQLRGRVGRGAAESVCVLLFAEPLGELAKARLKVIYEHTDGFEIARQDLNIRGPGEFLGARQSGVPMLRFAKLEE
DLHLLEQARETAPMLIEQNPEIVEAHLARWLSGREGYLGV

Nucleotide


Download         Length: 2043 bp        

>NTDB_id=48018 NMBM04240196_RS09605 WP_014581543.1 1846267..1848309(-) (recG) [Neisseria meningitidis M04-240196]
ATGATGTCGCCCGAAACCCAGAAACAGCTCAAAATCACCGATGTTTCCGCCAAGAAGCTCGACAAACTCAACCTCCATAC
CGCGTGGGATTTGGTGTTGCACCTGCCGCTGCGTTACGAGGACGAGACGCACATTATGCCGATTAAGGACGCGCCGATTG
GCGTGCCGTGCCAGGTCGAGGGCGAGGTTATCCATCAGGAAGTAACGTTCAAACCGCGCAAGCAGTTGATTGTCCAAATC
GCCGACGGTTCCGGCAGCGTCCTTTTTCTGCGCTTCATCCACTTTTACGCCAGCCATCAGAAACAGACGGCGGTCGGCAA
ACGCATCCGCGCCGTGGGCGAAATCAAACACGGCTTTTACGGCGACGAGATGATTCATCCCAAAATCCGCGATGCCGAGG
GCGGCGGTTTGGCGGAAAGCCTCACGCCGGTTTACCCGACCGTAAACGGTTTGAACCAGCCCACTTTGCGCCGTATTATT
CAGACGGCGTTGGACGTTACGCCGCTGCACGACACGCTGCCCGATGCCCTGCTGTGCCGTCTGAAGCTGCCACACCTCGC
CGAAAGCCTGCGTCTTTTGCATTTGCCGCCGCCGAGTTTCACGATTCATCAGCTTTCAGACGGCACGCTGCCTGCATGGC
AACGGCTCAAATTCGATGAACTTTTGGCGCAACAGCTTTCGATGCGCTTGGCGCGACAGAAGCGTATCGGCGGCACGGCG
GCGGCATTGGGCGGCGACGGCACATTGACCCAAGCCCTGCGCCAAGCCCTGCCGTTTGCCCTGACCGATGCGCAAGAAAA
AGTTGTTTCCGAAATCTGCCGCGATATGGCGCAAACCTACCCGATGCACCGCCTGCTGCAGGGCGATGTCGGCAGCGGCA
AAACCATTGTGGCTGCTTTGTCTGCTTTGACGGCTATCGAATCCGGTGCGCAGGTGGCTGTAATGGCGCCCACTGAAATC
CTTGCCGAACAGCATTTTATTAAATTTAAACAATGGCTCGAACCTTTGGGCATTGAAGTTGTCCGCCTTTTTGGCAGTTT
GCGTAAAAAAGCCAAAGACGAAGCCAAAGCCAAACTGGCTGACGGCAGCGTCAAAATCGCCGTCGGCACGCACGCCCTGT
TTTCAGACGGCGTGGCGTTTCACAATTTGGGCTTGACCATTGTGGACGAACAGCACCGTTTCGGCGTTGCCCAACGCCTC
GCCCTCAAAAACAAAGGGCGCGAAGTCCATCAGCTGATGATGTCCGCCACGCCCATCCCGCGCACGCTTGCGATGAGTTT
TTTCGCCGATTTGGACGTGTCCGTCATCGACGAATTGCCGCCCGGGCGCACACCGATTAAAACGCGCCTCGTCAACAACG
TCCGCCGCGCCGAAGTCGAAGGCTTCGTCCTCGGCACTTGCCGAAAAGGGCGGCAGGCGTATTGGGTCTGCCCATTGATT
GAAGAAAGCGAAACCCTGCAACTGCAAACCGCCGCCGAAACCCTCGCCCGGCTTCAGACGGCATTGCCCGAACTCAATAT
CGGACTGGTACACGGGCGCATGAAGGCCGCCGAAAAGGCCGAAGTGATGGCGCGGTTTTCTTCGGGGGGGCTGAACGTCT
TGGTCGCCACCACCGTCATCGAAGTCGGCGTAGATGTGCCCAATGCCGCCCTGATGGTCATCGAACACGCCGAGCGCATG
GGCTTGGCGCAGCTTCACCAATTACGCGGACGGGTAGGGCGCGGCGCGGCGGAAAGCGTGTGCGTCCTCCTGTTTGCCGA
ACCCTTGGGCGAACTCGCCAAAGCGCGGCTGAAAGTCATCTACGAACACACCGACGGCTTTGAAATCGCCCGCCAAGACC
TCAACATCCGCGGCCCCGGCGAATTTCTCGGCGCGCGCCAAAGCGGCGTGCCTATGCTGCGTTTCGCCAAGCTCGAAGAA
GACCTGCACCTCTTGGAACAAGCGCGCGAAACCGCCCCGATGCTGATTGAACAAAACCCCGAAATCGTCGAAGCGCATTT
GGCAAGGTGGCTTTCCGGCAGGGAAGGGTATTTGGGCGTGTGA

Domains

Predicted by InterproScan.

DEAD/DEAH box helicase (DEAD)

(262-421)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(604-666)

Helicase conserved C-terminal domain (Helicase_C)

(468-575)

RecG wedge domain (RecG_wedge)

(15-164)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

99.706

100

0.997

Multiple sequence alignment