Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NMBM04240196_RS04090 Genome accession   NC_017515
Coordinates   791554..792015 (-) Length   153 a.a.
NCBI ID   WP_014581408.1    Uniprot ID   -
Organism   Neisseria meningitidis M04-240196     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 786554..797015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM04240196_RS04065 (NMBM04240196_0728) surE 788074..788820 (+) 747 WP_014581406.1 5'/3'-nucleotidase SurE -
  NMBM04240196_RS04070 (NMBM04240196_0729) - 789076..790323 (+) 1248 WP_014581407.1 M23 family metallopeptidase -
  NMBM04240196_RS04075 (NMBM04240196_0730) - 790684..791166 (-) 483 WP_002234057.1 acyl-CoA thioesterase -
  NMBM04240196_RS15120 - 791319..791480 (-) 162 WP_002238113.1 hypothetical protein -
  NMBM04240196_RS04090 (NMBM04240196_0731) recX 791554..792015 (-) 462 WP_014581408.1 recombination regulator RecX Regulator
  NMBM04240196_RS04095 (NMBM04240196_0732) - 792083..792790 (-) 708 WP_014581409.1 phosphoglycolate phosphatase -
  NMBM04240196_RS04105 (NMBM04240196_0733) - 793197..794465 (+) 1269 WP_002216876.1 Glu/Leu/Phe/Val dehydrogenase -
  NMBM04240196_RS04110 (NMBM04240196_0734) - 794523..795329 (-) 807 WP_002212946.1 DUF4198 domain-containing protein -
  NMBM04240196_RS04115 (NMBM04240196_0735) - 795674..795883 (+) 210 WP_002212949.1 4-oxalocrotonate tautomerase family protein -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17663.04 Da        Isoelectric Point: 9.7352

>NTDB_id=47998 NMBM04240196_RS04090 WP_014581408.1 791554..792015(-) (recX) [Neisseria meningitidis M04-240196]
MKPQKSLRARAMDILSRQELSRIGLKRKLAPHAESEEELENVLNEFAERNWQSDLRYAEAYIRSKSRKHGSLRLKQALAQ
QGIDEETSCNLLPDRSSEKLAAIAVLRKKFKHPAADLKEKQKQARFLAYRGFDADTVQTALKHAWDENWEDGC

Nucleotide


Download         Length: 462 bp        

>NTDB_id=47998 NMBM04240196_RS04090 WP_014581408.1 791554..792015(-) (recX) [Neisseria meningitidis M04-240196]
ATGAAACCGCAAAAATCCCTACGCGCCCGCGCGATGGACATCCTCTCGCGCCAAGAACTCAGCCGCATCGGTCTGAAACG
CAAACTTGCACCGCACGCCGAAAGCGAAGAGGAGTTGGAAAACGTGTTAAACGAATTTGCCGAACGCAACTGGCAGTCGG
ATTTGCGCTATGCCGAAGCCTATATCCGCAGCAAAAGCCGCAAACACGGTTCATTGAGGCTGAAACAGGCTTTGGCGCAA
CAGGGCATAGATGAAGAAACCAGCTGCAACCTGCTTCCCGACCGCTCAAGCGAAAAACTGGCCGCCATAGCCGTGTTGCG
TAAAAAATTCAAACACCCCGCCGCCGACCTCAAAGAAAAACAAAAACAGGCGCGTTTCCTCGCCTATCGCGGATTCGATG
CCGATACCGTTCAGACGGCATTGAAACACGCTTGGGACGAAAATTGGGAAGACGGCTGCTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(30-143)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

96.078

100

0.961

Multiple sequence alignment