Detailed information NTG0479912

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: IAU63_RS11815
• Genome accession: NZ_CP061030
• Coordinates: 2470074..2471048 (-)
• Length: 324 a.a.
• NCBI ID: WP_014613820.1
• Uniprot ID: -
• Organism: Staphylococcus pseudintermedius strain Z0118SP0108
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2465074..2476048

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IAU63_RS11780	gcvT	2465648..2466739 (-)	1092	WP_015729161.1	glycine cleavage system aminomethyltransferase GcvT	-
IAU63_RS11785	-	2466897..2467424 (-)	528	WP_014613826.1	shikimate kinase	-
IAU63_RS11790	-	2467588..2467953 (-)	366	WP_241731293.1	hypothetical protein	-
IAU63_RS11795	-	2467979..2468212 (-)	234	WP_014613824.1	hypothetical protein	-
IAU63_RS11800	comGD	2468284..2468745 (-)	462	WP_241735330.1	competence type IV pilus minor pilin ComGD	-
IAU63_RS11805	comGC	2468702..2469025 (-)	324	WP_015729165.1	competence type IV pilus major pilin ComGC	Machinery gene
IAU63_RS11810	comGB	2469038..2470105 (-)	1068	WP_015729166.1	competence type IV pilus assembly protein ComGB	-
IAU63_RS11815	comGA	2470074..2471048 (-)	975	WP_014613820.1	competence type IV pilus ATPase ComGA	Machinery gene
IAU63_RS11820	-	2471208..2471837 (-)	630	WP_015729230.1	MBL fold metallo-hydrolase	-
IAU63_RS11825	-	2471850..2472161 (-)	312	WP_015729231.1	MTH1187 family thiamine-binding protein	-
IAU63_RS11830	-	2472162..2473148 (-)	987	WP_014613817.1	ROK family glucokinase	-
IAU63_RS11835	-	2473145..2473348 (-)	204	WP_014613816.1	YqgQ family protein	-
IAU63_RS11840	-	2473350..2474789 (-)	1440	WP_096533269.1	rhomboid family intramembrane serine protease	-
IAU63_RS11845	-	2474808..2475347 (-)	540	WP_014613814.1	5-formyltetrahydrofolate cyclo-ligase	-
IAU63_RS11850	rpmG	2475499..2475648 (-)	150	WP_014613813.1	50S ribosomal protein L33	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 36846.58 Da
• Isoelectric Point: 7.5584

>NTDB_id=479912 IAU63_RS11815 WP_014613820.1 2470074..2471048(-) (comGA) [Staphylococcus pseudintermedius strain Z0118SP0108]
MQLLLDHVIQFALQNEASDIHFIPSQSQVEVKLRVKDQLVLYDTLNLETYQKLLTLLKYQAGLDISTRHKAQSGRYIYEH
KALYYLRVSTLPLNLGTESCVIRITPQYFQNAKAHSVLDIKSNMEKKQGLILFSGPTGAGKSTLMYQMVVYAKQKLNLNI
ITIEDPVEQLVNGITQISVNEKADITYGSSLKAILRCDPDVILIGEIRDSHIARDVIQASLSGHLVLSTIHANDCQGVLL
RLIEMGLSHQDLSQSINLIINQRLITTKNDQRQLVYETMDQQEIHYFLNNNFQLPTAFTSLSHKLQLLNKEGVIDEKILR
KYTI

Nucleotide

• Length: 975 bp

>NTDB_id=479912 IAU63_RS11815 WP_014613820.1 2470074..2471048(-) (comGA) [Staphylococcus pseudintermedius strain Z0118SP0108]
ATGCAACTACTATTAGATCATGTAATACAATTTGCACTTCAAAATGAGGCGTCAGACATTCATTTTATCCCATCACAATC
ACAAGTCGAAGTGAAACTCAGAGTGAAAGATCAACTTGTATTATATGACACATTAAATCTAGAAACGTATCAAAAATTGT
TAACTTTGTTGAAATACCAAGCTGGATTAGATATTTCGACACGCCACAAAGCGCAAAGTGGGCGCTATATTTATGAACAT
AAAGCGTTATATTATTTAAGAGTGTCCACGTTACCTTTAAACTTAGGTACTGAAAGTTGTGTTATTCGTATTACACCCCA
ATATTTTCAAAATGCGAAAGCTCATAGTGTATTAGACATCAAATCTAATATGGAGAAAAAGCAAGGTTTAATTCTGTTTA
GCGGGCCTACAGGTGCAGGAAAGAGCACGTTAATGTATCAAATGGTCGTCTATGCTAAACAAAAGTTAAACCTGAATATT
ATCACAATAGAAGACCCGGTCGAGCAGCTTGTGAATGGCATTACGCAAATTTCCGTTAATGAAAAAGCTGATATTACGTA
TGGATCATCGTTAAAAGCAATTCTTCGTTGTGATCCAGATGTCATCTTAATTGGTGAGATTCGTGACAGTCATATTGCAA
GGGACGTTATACAAGCGAGTTTAAGCGGGCATTTAGTATTGTCGACGATACACGCCAATGATTGTCAAGGGGTGCTCCTT
AGACTGATTGAAATGGGACTCTCTCACCAAGATTTATCTCAATCTATCAATCTCATCATCAATCAAAGACTCATTACAAC
AAAAAACGACCAGCGACAACTCGTCTATGAAACGATGGATCAACAGGAGATTCATTACTTTTTGAATAATAACTTCCAAC
TACCTACTGCTTTCACAAGCCTTTCTCATAAGCTTCAACTTCTGAATAAAGAGGGGGTTATAGATGAAAAGATTTTACGA
AAGTATACGATTTAA

Domains

Predicted by InterProScan.

• Type II/IV secretion system protein (T2SSE) (9-266)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	58.514	99.691	0.583
comGA	Staphylococcus aureus N315	58.514	99.691	0.583