Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA2   Type   Machinery gene
Locus tag   NMBM04240196_RS01700 Genome accession   NC_017515
Coordinates   309053..309748 (+) Length   231 a.a.
NCBI ID   WP_002226967.1    Uniprot ID   -
Organism   Neisseria meningitidis M04-240196     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 304053..314748
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBM04240196_RS01680 (NMBM04240196_0297) - 304570..305481 (-) 912 WP_002215698.1 LysR family transcriptional regulator -
  NMBM04240196_RS01685 (NMBM04240196_0298) - 305589..305987 (+) 399 WP_002216361.1 DoxX family protein -
  NMBM04240196_RS01690 (NMBM04240196_0299) - 306036..306641 (+) 606 WP_002215700.1 nitroreductase family protein -
  NMBM04240196_RS01695 (NMBM04240196_0300) - 306827..308938 (+) 2112 Protein_305 TonB-dependent receptor -
  NMBM04240196_RS01700 (NMBM04240196_0301) dsbA2 309053..309748 (+) 696 WP_002226967.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMBM04240196_RS01705 (NMBM04240196_0302) ffh 310081..311451 (-) 1371 WP_014581321.1 signal recognition particle protein -
  NMBM04240196_RS01710 (NMBM04240196_0303) - 311671..312477 (+) 807 WP_002242238.1 inner membrane protein YpjD -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 25358.84 Da        Isoelectric Point: 5.3576

>NTDB_id=47990 NMBM04240196_RS01700 WP_002226967.1 309053..309748(+) (dsbA2) [Neisseria meningitidis M04-240196]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAPLTEGVNYTVLSTPIPQQQAGKVEVLEFFGYFCPHCA
HLEPVLSEHTKTFKDDTYLRREHVIWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFDAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=47990 NMBM04240196_RS01700 WP_002226967.1 309053..309748(+) (dsbA2) [Neisseria meningitidis M04-240196]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCAGCCCCATTGACCGAAGGCGTGAACTACACTGTAT
TGTCCACGCCTATCCCGCAACAGCAGGCCGGCAAAGTCGAAGTCTTGGAATTTTTCGGCTACTTCTGTCCGCATTGCGCA
CATTTGGAACCGGTTTTGAGCGAACACACCAAAACGTTTAAAGACGATACCTACCTGCGTCGCGAGCATGTGATTTGGGG
TGACGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGATGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATCGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(64-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

96.537

100

0.965
  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714

Multiple sequence alignment