Detailed information NTG0479771

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: IBB94_RS06805
• Genome accession: NZ_CP061024
• Coordinates: 1327657..1328583 (-)
• Length: 308 a.a.
• NCBI ID: WP_064355560.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 13498
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1322657..1333583

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBB94_RS06775 (IBB94_06785)	-	1322735..1323529 (-)	795	WP_084829753.1	HAD family hydrolase	-
IBB94_RS06780 (IBB94_06790)	-	1323713..1324090 (+)	378	WP_011226300.1	GntR family transcriptional regulator	-
IBB94_RS06785 (IBB94_06795)	-	1324095..1324793 (+)	699	WP_011226301.1	ABC transporter ATP-binding protein	-
IBB94_RS06790 (IBB94_06800)	-	1324805..1325590 (+)	786	WP_207559818.1	ABC transporter permease	-
IBB94_RS06795 (IBB94_06805)	amiF	1325640..1326569 (-)	930	WP_011681415.1	ATP-binding cassette domain-containing protein	Regulator
IBB94_RS06800 (IBB94_06810)	amiE	1326562..1327647 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
IBB94_RS06805 (IBB94_06815)	amiD	1327657..1328583 (-)	927	WP_064355560.1	oligopeptide ABC transporter permease OppC	Regulator
IBB94_RS06810 (IBB94_06820)	amiC	1328583..1330076 (-)	1494	WP_064355564.1	ABC transporter permease	Regulator
IBB94_RS06815 (IBB94_06825)	amiA3	1330137..1332110 (-)	1974	WP_101415657.1	peptide ABC transporter substrate-binding protein	Regulator
IBB94_RS06820 (IBB94_06830)	-	1332416..1333563 (+)	1148	WP_095559415.1	IS3 family transposase	-

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34650.80 Da
• Isoelectric Point: 9.7054

>NTDB_id=479771 IBB94_RS06805 WP_064355560.1 1327657..1328583(-) (amiD) [Streptococcus thermophilus strain 13498]
MASIDKSKFQFVKRDDFASETIDAPSYSYWKSVMRQFFKKKSTVVMLGILIAIVLMSFIYPMFSKFDFNDVSKVNDFSLR
YVHPNAQYWFGTDGNGKSLFDSVWFGARNSILIAVIATFLNVIIGLLVGAVWGISKTFDMIMMEIYNIISNIPSLLVVIV
LTYSLGAGFWNMIFAMTVTGWIGIAYTIRIQIMRYRDLEYNLASRNLGTPTAKIVIKNIMPQLVSVIVTMASQLLPGFIS
YEAFLSYFGLGLPVTTPSLGRLISDYAQNVTVNAYLFWIPLTTLILVSLALFIVGQNLADASDPRTHR

Nucleotide

• Length: 927 bp

>NTDB_id=479771 IBB94_RS06805 WP_064355560.1 1327657..1328583(-) (amiD) [Streptococcus thermophilus strain 13498]
ATGGCTTCAATTGATAAAAGTAAGTTCCAATTTGTAAAGCGCGATGATTTTGCCTCTGAAACAATTGATGCACCGTCTTA
CTCATACTGGAAATCAGTGATGCGTCAATTTTTTAAAAAGAAATCAACAGTTGTAATGTTGGGAATCTTGATTGCTATTG
TTTTGATGAGTTTCATCTACCCAATGTTTTCTAAATTTGACTTCAATGATGTCTCAAAAGTAAATGATTTCAGTTTGCGT
TATGTACATCCAAACGCTCAATACTGGTTCGGTACTGACGGTAATGGTAAGTCTCTATTTGACAGTGTTTGGTTTGGGGC
TCGTAATTCTATCCTTATCGCTGTTATCGCTACCTTCCTGAATGTTATAATTGGTTTGCTTGTAGGTGCTGTTTGGGGGA
TTTCTAAGACCTTCGATATGATTATGATGGAAATCTACAACATCATCTCAAATATTCCCTCTCTCCTTGTGGTTATCGTC
TTGACTTACTCATTAGGTGCTGGTTTTTGGAATATGATTTTTGCCATGACCGTAACAGGTTGGATTGGTATTGCCTACAC
AATCCGTATTCAAATCATGCGTTATCGTGATTTGGAGTATAACTTGGCTTCTCGCAATTTGGGAACACCAACGGCTAAGA
TTGTGATTAAAAATATTATGCCACAACTTGTGTCAGTTATTGTAACCATGGCTAGTCAACTTTTGCCAGGATTTATCTCT
TATGAGGCCTTCCTTTCATACTTTGGTTTGGGTCTTCCTGTTACTACGCCTAGTCTTGGTCGTTTGATTTCAGATTATGC
ACAGAACGTTACAGTCAATGCCTATCTCTTCTGGATTCCATTGACTACCTTGATTCTTGTTTCTCTTGCCCTCTTTATTG
TTGGTCAAAACTTAGCGGATGCTAGTGACCCACGTACGCATAGATAG

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-306)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-71)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	99.351	100	0.994
amiD	Streptococcus thermophilus LMD-9	99.351	100	0.994
amiD	Streptococcus salivarius strain HSISS4	96.429	100	0.964