Detailed information NTG0479539

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: IBC04_RS06835
• Genome accession: NZ_CP061020
• Coordinates: 1320894..1321979 (-)
• Length: 361 a.a.
• NCBI ID: WP_011226304.1
• Uniprot ID: -
• Organism: Streptococcus thermophilus strain 24740
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1315894..1326979

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IBC04_RS06805 (IBC04_06825)	-	1316258..1317073 (-)	816	WP_014608539.1	Cof-type HAD-IIB family hydrolase	-
IBC04_RS06810 (IBC04_06830)	-	1317066..1317860 (-)	795	WP_138496582.1	HAD family hydrolase	-
IBC04_RS06815 (IBC04_06835)	-	1318045..1318422 (+)	378	WP_011681413.1	GntR family transcriptional regulator	-
IBC04_RS06820 (IBC04_06840)	-	1318427..1319125 (+)	699	WP_207559903.1	ABC transporter ATP-binding protein	-
IBC04_RS06825 (IBC04_06845)	-	1319137..1319922 (+)	786	WP_002951425.1	hypothetical protein	-
IBC04_RS06830 (IBC04_06850)	amiF	1319972..1320901 (-)	930	WP_002951426.1	ATP-binding cassette domain-containing protein	Regulator
IBC04_RS06835 (IBC04_06855)	amiE	1320894..1321979 (-)	1086	WP_011226304.1	ABC transporter ATP-binding protein	Regulator
IBC04_RS06840 (IBC04_06860)	amiD	1321989..1322915 (-)	927	WP_002946409.1	oligopeptide ABC transporter permease OppC	Regulator
IBC04_RS06845 (IBC04_06865)	amiC	1322915..1324408 (-)	1494	WP_011227407.1	ABC transporter permease	Regulator
IBC04_RS06850 (IBC04_06870)	amiA3	1324470..1326437 (-)	1968	WP_207563326.1	peptide ABC transporter substrate-binding protein	Regulator

Sequence

Protein

• Length: 361 a.a.
• Molecular weight: 39864.62 Da
• Isoelectric Point: 4.7435

>NTDB_id=479539 IBC04_RS06835 WP_011226304.1 1320894..1321979(-) (amiE) [Streptococcus thermophilus strain 24740]
MTENKNVILSARDIVVEFDVRDRVLTAIRGVSLDLVEGEVLALVGESGSGKSVLTKTFTGMLEENGRVASGSIDYRGKDL
TKFKSHQDWAAIRGAKIATIFQDPMTSLNPIKTIGSQIIEVIVKHQGKTAKEAKKMAIDYMDKVGIPDAEKRFNEYPFQY
SGGMRQRIVIAIALACRPDVLICDEPTTALDVTIQAQIIDLLKSLKEEYGFSVIFITHDLGVVASIADKVAVMYAGEIIE
YATVEEIFYEPCHPYTWSLLSSLPQLADDNGKLFSIPGTPPSLYTPVVGDAFALRSDYALQIDFEEKAPQFQVSDTHWAK
TWLLHEDAPKVDKPAVIQNLHEKILANMGFAHLGDEEEGNA

Nucleotide

• Length: 1086 bp

>NTDB_id=479539 IBC04_RS06835 WP_011226304.1 1320894..1321979(-) (amiE) [Streptococcus thermophilus strain 24740]
ATGACAGAAAATAAAAATGTAATATTATCGGCTCGCGATATCGTCGTGGAATTTGACGTTCGTGACCGTGTTTTGACAGC
TATTCGAGGGGTTTCTCTTGATTTAGTTGAAGGTGAAGTTTTAGCCTTGGTTGGTGAGTCTGGTTCAGGAAAATCAGTCT
TGACTAAAACTTTTACAGGGATGCTGGAAGAAAATGGTCGTGTAGCTAGCGGATCTATCGACTACCGTGGCAAAGACTTG
ACTAAATTTAAGAGTCACCAAGATTGGGCAGCTATCCGTGGAGCTAAGATTGCAACTATTTTCCAAGATCCAATGACCAG
TCTTAACCCAATTAAGACTATCGGAAGTCAAATTATTGAAGTTATTGTTAAGCACCAAGGGAAAACAGCCAAGGAAGCTA
AAAAAATGGCAATTGATTACATGGACAAGGTTGGTATTCCAGATGCTGAAAAACGTTTCAATGAATATCCTTTCCAATAC
TCTGGTGGGATGCGTCAACGTATCGTTATTGCCATTGCCTTGGCTTGTCGTCCTGATGTCCTTATCTGTGACGAACCAAC
AACTGCCCTTGATGTGACCATTCAAGCTCAAATCATTGACCTCTTGAAATCACTCAAAGAGGAGTATGGTTTCTCGGTCA
TTTTCATTACCCATGACCTTGGCGTCGTAGCAAGTATCGCGGACAAGGTTGCTGTCATGTATGCTGGCGAAATCATTGAA
TACGCAACTGTTGAGGAAATTTTCTATGAGCCTTGTCATCCATACACGTGGAGCTTGCTTTCAAGTCTGCCACAATTGGC
TGATGATAATGGAAAACTCTTCTCAATTCCAGGGACGCCACCATCACTTTATACACCAGTTGTTGGGGATGCCTTTGCCT
TGCGTTCAGATTATGCTTTGCAGATTGATTTTGAGGAAAAAGCACCACAATTCCAAGTTTCAGATACTCACTGGGCTAAG
ACCTGGCTCTTACATGAGGATGCGCCAAAAGTTGATAAACCTGCGGTTATCCAAAATCTACATGAAAAAATCCTAGCCAA
TATGGGATTTGCACATTTAGGAGATGAGGAGGAAGGCAATGCCTGA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (29-187)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	100	100	1
amiE	Streptococcus thermophilus LMD-9	100	100	1
amiE	Streptococcus salivarius strain HSISS4	96.953	100	0.97
oppD	Streptococcus mutans UA159	54.441	96.676	0.526