Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   J4Q32_RS09230 Genome accession   NZ_CP071916
Coordinates   1786359..1786979 (-) Length   206 a.a.
NCBI ID   WP_000839909.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 19A-19087     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1781359..1791979
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J4Q32_RS09205 (J4Q32_09205) recA 1781736..1782902 (-) 1167 WP_001085462.1 recombinase RecA -
  J4Q32_RS09210 (J4Q32_09210) cinA 1782957..1784213 (-) 1257 WP_000642704.1 competence/damage-inducible protein A Machinery gene
  J4Q32_RS09215 (J4Q32_09215) brpA 1784298..1785314 (-) 1017 WP_000239278.1 biofilm formation/cell division transcriptional regulator BrpA -
  J4Q32_RS09220 (J4Q32_09220) - 1785322..1785840 (-) 519 WP_000455536.1 GNAT family N-acetyltransferase -
  J4Q32_RS09225 (J4Q32_09225) tsaE 1785830..1786273 (-) 444 WP_000288230.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  J4Q32_RS09230 (J4Q32_09230) comM 1786359..1786979 (-) 621 WP_000839909.1 hypothetical protein Regulator
  J4Q32_RS09235 (J4Q32_09235) - 1787285..1788148 (-) 864 WP_001093609.1 helix-turn-helix domain-containing protein -
  J4Q32_RS11350 - 1788340..1788510 (+) 171 WP_001227863.1 PhrA family quorum-sensing system peptide -
  J4Q32_RS09240 (J4Q32_09240) - 1788912..1789226 (+) 315 WP_000420682.1 YdcP family protein -
  J4Q32_RS09245 (J4Q32_09245) - 1789242..1789628 (+) 387 WP_000985015.1 YdcP family protein -
  J4Q32_RS09250 (J4Q32_09250) - 1789657..1791042 (+) 1386 WP_000813494.1 FtsK/SpoIIIE domain-containing protein -
  J4Q32_RS09255 (J4Q32_09255) - 1791045..1791197 (+) 153 WP_000879507.1 hypothetical protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23540.66 Da        Isoelectric Point: 10.1254

>NTDB_id=479248 J4Q32_RS09230 WP_000839909.1 1786359..1786979(-) (comM) [Streptococcus pneumoniae strain 19A-19087]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYTGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=479248 J4Q32_RS09230 WP_000839909.1 1786359..1786979(-) (comM) [Streptococcus pneumoniae strain 19A-19087]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATACTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

99.515

100

0.995
  comM Streptococcus pneumoniae R6

99.515

100

0.995
  comM Streptococcus pneumoniae TIGR4

99.515

100

0.995
  comM Streptococcus mitis NCTC 12261

38.462

94.66

0.364
  comM Streptococcus mitis SK321

38.462

94.66

0.364