Detailed information    

insolico Bioinformatically predicted

Overview


Name   tpc   Type   Machinery gene
Locus tag   NMBG2136_RS03525 Genome accession   NC_017513
Coordinates   670663..671661 (-) Length   332 a.a.
NCBI ID   WP_002226542.1    Uniprot ID   -
Organism   Neisseria meningitidis G2136     
Function   DNA processing; DNA transport into the cytoplasm (predicted from homology)   
DNA processing DNA binding and uptake

Genomic Context


Location: 665663..676661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMBG2136_RS03505 (NMBG2136_0636) - 667041..667667 (-) 627 WP_002221271.1 phosphoribosylanthranilate isomerase -
  NMBG2136_RS03510 (NMBG2136_0637) greB 667726..668217 (-) 492 WP_014580763.1 transcription elongation factor GreB -
  NMBG2136_RS03515 (NMBG2136_0638) purF 668317..669861 (-) 1545 WP_002221269.1 amidophosphoribosyltransferase -
  NMBG2136_RS14530 - 670006..670176 (-) 171 WP_153308407.1 hypothetical protein -
  NMBG2136_RS03520 (NMBG2136_0639) - 670173..670670 (-) 498 WP_002214153.1 CvpA family protein -
  NMBG2136_RS03525 (NMBG2136_0640) tpc 670663..671661 (-) 999 WP_002226542.1 cell division protein FtsN Machinery gene
  NMBG2136_RS03530 (NMBG2136_0641) folC 671674..672948 (-) 1275 WP_002226541.1 bifunctional tetrahydrofolate synthase/dihydrofolate synthase -
  NMBG2136_RS03535 (NMBG2136_0642) - 672979..673425 (-) 447 WP_002226540.1 protein YgfX -
  NMBG2136_RS03540 (NMBG2136_0643) - 673430..673789 (-) 360 WP_002226539.1 hypothetical protein -
  NMBG2136_RS03545 (NMBG2136_0644) - 673862..674590 (-) 729 WP_002217681.1 amino acid ABC transporter ATP-binding protein -
  NMBG2136_RS03550 (NMBG2136_0645) rsmA 674763..675542 (-) 780 WP_002226538.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  NMBG2136_RS03555 (NMBG2136_0646) - 675754..676443 (+) 690 WP_002226537.1 uracil-DNA glycosylase family protein -

Sequence


Protein


Download         Length: 332 a.a.        Molecular weight: 35529.90 Da        Isoelectric Point: 10.1759

>NTDB_id=47900 NMBG2136_RS03525 WP_002226542.1 670663..671661(-) (tpc) [Neisseria meningitidis G2136]
MSENKHNEVLSGYEQLKRRNRRRLVTASCLVAASCILLAAALSSGPAEQTAGETSGVENKAAGAAQTPALKSAADKPQDL
AGEDKPSAADSEISEPENVGAPLVLINDRLEDSNIKGLEASEKLQQAETAKTAPKQAKQRAAEKVPATADSTDTVAVEKP
KRTAETKPQKAERTAKAKPKAKETKTAEKVADKPKTAAEKTKPDTAKSDSAVKEAKKADKAESKKTAEKDRSDGKKHETA
QKTDKADKTKTAEKEKSGKKAAIQAGYAEKERALSLQRKMKAAGIDSTITEIMTDNGKVYRVKSSNYKNARDAERDLNKL
RVHGIAGQVTNE

Nucleotide


Download         Length: 999 bp        

>NTDB_id=47900 NMBG2136_RS03525 WP_002226542.1 670663..671661(-) (tpc) [Neisseria meningitidis G2136]
ATGTCCGAAAACAAACACAACGAAGTCCTGAGCGGTTACGAACAACTCAAACGGCGCAACCGCCGCCGCCTCGTAACGGC
AAGTTGCCTGGTTGCCGCCTCCTGCATCCTGCTGGCAGCCGCCCTCAGTTCCGGCCCTGCCGAACAGACTGCCGGCGAAA
CAAGCGGCGTAGAAAACAAAGCGGCAGGTGCGGCACAAACCCCTGCCTTGAAATCCGCCGCCGACAAACCGCAGGACTTG
GCAGGCGAAGACAAGCCTTCTGCCGCCGACAGCGAAATCAGCGAGCCTGAAAACGTAGGCGCGCCGCTGGTGCTGATTAA
CGACCGCCTCGAAGACAGCAACATCAAAGGTTTGGAAGCATCCGAGAAACTGCAACAGGCAGAAACCGCCAAAACCGCAC
CGAAGCAGGCAAAACAACGCGCTGCCGAAAAAGTGCCGGCAACTGCCGACAGTACGGATACGGTAGCGGTTGAAAAACCG
AAACGCACTGCCGAAACAAAACCGCAAAAAGCAGAACGCACTGCCAAAGCCAAGCCCAAAGCCAAAGAAACCAAAACCGC
CGAAAAAGTTGCCGACAAACCGAAAACTGCCGCCGAAAAAACCAAACCGGATACGGCAAAATCCGACAGCGCGGTAAAAG
AAGCGAAAAAAGCCGACAAGGCTGAAAGCAAAAAAACAGCCGAAAAAGACCGTTCGGACGGCAAAAAACACGAAACGGCA
CAAAAAACCGACAAAGCGGACAAGACCAAAACCGCCGAGAAGGAAAAATCCGGTAAAAAAGCCGCCATTCAGGCAGGTTA
TGCCGAAAAAGAACGCGCCTTAAGCCTCCAGCGCAAAATGAAAGCGGCGGGTATCGATTCGACCATCACCGAAATTATGA
CCGACAACGGCAAAGTTTACCGCGTCAAATCAAGCAACTATAAAAACGCAAGGGATGCCGAACGCGATTTGAACAAATTG
CGCGTACACGGTATCGCCGGTCAGGTAACGAATGAATAA

Domains


Predicted by InterproScan.

(259-330)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tpc Neisseria gonorrhoeae MS11

89.595

100

0.934


Multiple sequence alignment