Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   NMAA_RS09335 Genome accession   NC_017512
Coordinates   1791762..1792406 (-) Length   214 a.a.
NCBI ID   WP_002212479.1    Uniprot ID   -
Organism   Neisseria meningitidis WUE 2594     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1786762..1797406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMAA_RS09300 (NMAA_1523) ftsL 1787132..1787395 (-) 264 WP_002232818.1 cell division protein FtsL -
  NMAA_RS09305 (NMAA_1524) rsmH 1787392..1788378 (-) 987 WP_002243996.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  NMAA_RS09310 (NMAA_1525) mraZ 1788375..1788830 (-) 456 WP_002212482.1 division/cell wall cluster transcriptional repressor MraZ -
  NMAA_RS09315 (NMAA_1526) - 1789136..1790326 (+) 1191 WP_050389241.1 class I SAM-dependent methyltransferase -
  NMAA_RS09330 (NMAA_1527) - 1790908..1791729 (-) 822 WP_002239524.1 undecaprenyl-diphosphate phosphatase -
  NMAA_RS09335 (NMAA_1528) dsbA1 1791762..1792406 (-) 645 WP_002212479.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMAA_RS09340 (NMAA_1529) ftsN 1792409..1793272 (-) 864 WP_002234558.1 cell division protein FtsN -
  NMAA_RS09345 (NMAA_1530) comM 1793378..1794874 (-) 1497 WP_002245890.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  NMAA_RS09350 (NMAA_1531) - 1794888..1795208 (-) 321 WP_002216505.1 accessory factor UbiK family protein -
  NMAA_RS09360 (NMAA_1532) putP 1795690..1797216 (+) 1527 WP_002236704.1 sodium/proline symporter PutP -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23983.98 Da        Isoelectric Point: 9.8294

>NTDB_id=47875 NMAA_RS09335 WP_002212479.1 1791762..1792406(-) (dsbA1) [Neisseria meningitidis WUE 2594]
MKLKHLLPLLLSAVLSAQAYALTEREDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRSVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQTPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=47875 NMAA_RS09335 WP_002212479.1 1791762..1792406(-) (dsbA1) [Neisseria meningitidis WUE 2594]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAAGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCTGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGTCGGTTGCCGGAAAGTGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCTCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAACGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGACCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.684

87.383

0.495
  dsbA2 Neisseria meningitidis MC58

51.075

86.916

0.444

Multiple sequence alignment