Detailed information NTG0478411

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: H9S87_RS05300
• Genome accession: NZ_CP060799
• Coordinates: 1105733..1106695 (+)
• Length: 320 a.a.
• NCBI ID: WP_034663299.1
• Uniprot ID: -
• Organism: Bacillus pumilus strain ONU 554
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1100733..1111695

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H9S87_RS05270 (H9S87_05270)	argF	1101060..1102010 (+)	951	WP_034663317.1	ornithine carbamoyltransferase	-
H9S87_RS05275 (H9S87_05275)	-	1102113..1102292 (+)	180	WP_034663316.1	YjzC family protein	-
H9S87_RS05280 (H9S87_05280)	-	1102461..1103726 (+)	1266	WP_034663308.1	MFS transporter	-
H9S87_RS05285 (H9S87_05285)	-	1103845..1104039 (-)	195	WP_003211779.1	YjzD family protein	-
H9S87_RS05290 (H9S87_05290)	-	1104251..1104991 (+)	741	WP_034663305.1	hypothetical protein	-
H9S87_RS05295 (H9S87_05295)	-	1105067..1105642 (+)	576	WP_034663302.1	hypothetical protein	-
H9S87_RS05300 (H9S87_05300)	med	1105733..1106695 (+)	963	WP_034663299.1	BMP family ABC transporter substrate-binding protein	Regulator
H9S87_RS05305 (H9S87_05305)	comZ	1106706..1106903 (+)	198	WP_003211983.1	ComZ family protein	Regulator
H9S87_RS05310 (H9S87_05310)	-	1106913..1107146 (-)	234	WP_034663296.1	hypothetical protein	-
H9S87_RS05315 (H9S87_05315)	-	1107316..1108254 (+)	939	WP_012009552.1	beta-ketoacyl-ACP synthase III	-
H9S87_RS05320 (H9S87_05320)	fabF	1108276..1109517 (+)	1242	WP_034663293.1	beta-ketoacyl-ACP synthase II	-
H9S87_RS05325 (H9S87_05325)	-	1109595..1110389 (+)	795	WP_034663290.1	DUF2268 domain-containing protein	-
H9S87_RS05330 (H9S87_05330)	-	1110558..1111538 (+)	981	WP_045210037.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 320 a.a.
• Molecular weight: 35693.57 Da
• Isoelectric Point: 5.2616

>NTDB_id=478411 H9S87_RS05300 WP_034663299.1 1105733..1106695(+) (med) [Bacillus pumilus strain ONU 554]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGNKPQADNVANVTFKGEAMGFFGGMTAAHMSKSKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADNLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYTIIAKKFNEGKLNEQGDYSFDFKEGVIEMGKFSSTIDRAFVKDIESDIATYKKTGKLPNEK

Nucleotide

• Length: 963 bp

>NTDB_id=478411 H9S87_RS05300 WP_034663299.1 1105733..1106695(+) (med) [Bacillus pumilus strain ONU 554]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTCGCGAATGTGACGTTTAAAGGTG
AAGCGATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCAAAATCAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGATGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCTGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAGCAGGGCGTAGATGTTGTATATCCAGCAG
GCGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAATTTATCAGCGATCGGATATGTCACTGATCAATCC
AACCTCGGCAGTCATACCGTCTTAACAAGCACAGTCCAGCATGTGGATAAAGCGTACACTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAACGAACAAGGTGACTACTCCTTTGATTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTGTGAAAGATATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (28-318)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.537	97.813	0.631