Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   H9L16_RS08620 Genome accession   NZ_CP060719
Coordinates   1899207..1899608 (+) Length   133 a.a.
NCBI ID   WP_187551331.1    Uniprot ID   A0A7G9SLT2
Organism   Thermomonas carbonis strain KCTC 42013     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1894207..1904608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H9L16_RS08600 (H9L16_08600) tsaB 1895886..1896620 (+) 735 WP_187551327.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  H9L16_RS08605 (H9L16_08605) - 1896690..1897175 (+) 486 WP_187551328.1 hypothetical protein -
  H9L16_RS08610 (H9L16_08610) - 1897195..1898085 (-) 891 WP_187551329.1 energy transducer TonB -
  H9L16_RS08615 (H9L16_08615) gshB 1898085..1899047 (-) 963 WP_187551330.1 glutathione synthase -
  H9L16_RS08620 (H9L16_08620) pilG 1899207..1899608 (+) 402 WP_187551331.1 twitching motility response regulator PilG Regulator
  H9L16_RS08625 (H9L16_08625) - 1899627..1899992 (+) 366 WP_187551332.1 response regulator -
  H9L16_RS08630 (H9L16_08630) - 1900271..1900822 (+) 552 WP_229796656.1 chemotaxis protein CheW -
  H9L16_RS08635 (H9L16_08635) - 1900856..1902871 (+) 2016 WP_187551333.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14805.12 Da        Isoelectric Point: 6.9530

>NTDB_id=478021 H9L16_RS08620 WP_187551331.1 1899207..1899608(+) (pilG) [Thermomonas carbonis strain KCTC 42013]
MAQQDETGINLQGLRVMVIDDSKTIRRTAETLLAREGCDVVTATDGFEALAKIADHNPQIIFVDIMMPRLDGYQACALIK
NNQTFKTVPVIMLSSKDGLFDKARGRIVGSEQYLTKPFTREELLGAIRKYVNA

Nucleotide


Download         Length: 402 bp        

>NTDB_id=478021 H9L16_RS08620 WP_187551331.1 1899207..1899608(+) (pilG) [Thermomonas carbonis strain KCTC 42013]
ATGGCGCAGCAAGACGAGACAGGCATCAACCTCCAGGGTTTGAGGGTGATGGTCATCGACGACTCGAAGACGATCCGGCG
CACGGCGGAAACGCTGCTTGCGCGGGAGGGCTGCGACGTGGTCACCGCAACCGACGGGTTCGAGGCGCTGGCGAAGATCG
CCGACCACAACCCGCAGATCATTTTCGTGGACATCATGATGCCGCGGCTCGACGGCTATCAGGCCTGCGCGCTGATCAAG
AACAACCAGACATTCAAAACTGTGCCCGTGATCATGCTTTCGTCGAAGGATGGTTTGTTCGACAAGGCGCGTGGTCGTAT
CGTGGGCTCCGAGCAATATCTGACCAAGCCCTTCACTCGTGAAGAACTGCTTGGTGCCATTCGGAAGTACGTCAACGCCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7G9SLT2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.984

92.481

0.684
  vicR Streptococcus mutans UA159

41.026

87.97

0.361