Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE0566   Type   Regulator
Locus tag   J3Q17_RS02405 Genome accession   NZ_CP071576
Coordinates   464451..465101 (-) Length   216 a.a.
NCBI ID   WP_002874366.1    Uniprot ID   -
Organism   Campylobacter jejuni strain R12     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 459451..470101
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J3Q17_RS02365 (J3Q17_02365) - 459566..460300 (-) 735 WP_002874353.1 hypothetical protein -
  J3Q17_RS02370 (J3Q17_02370) - 460302..461156 (-) 855 WP_002874354.1 lambda-exonuclease family protein -
  J3Q17_RS02375 (J3Q17_02375) - 461158..461385 (-) 228 WP_002874355.1 helix-turn-helix domain-containing protein -
  J3Q17_RS02380 (J3Q17_02380) - 461376..461633 (-) 258 WP_002865124.1 hypothetical protein -
  J3Q17_RS02385 (J3Q17_02385) - 461624..461893 (-) 270 WP_002874357.1 hypothetical protein -
  J3Q17_RS02390 (J3Q17_02390) - 462453..462725 (-) 273 WP_002874359.1 hypothetical protein -
  J3Q17_RS02395 (J3Q17_02395) - 462869..463600 (+) 732 WP_002861653.1 hypothetical protein -
  J3Q17_RS02400 (J3Q17_02400) - 463634..464458 (-) 825 WP_002874362.1 hypothetical protein -
  J3Q17_RS02405 (J3Q17_02405) CJE0566 464451..465101 (-) 651 WP_002874366.1 DNA/RNA non-specific endonuclease Regulator
  J3Q17_RS02410 (J3Q17_02410) - 465145..465417 (-) 273 WP_002795981.1 hypothetical protein -
  J3Q17_RS02415 (J3Q17_02415) - 465398..466294 (-) 897 WP_002874367.1 hypothetical protein -
  J3Q17_RS02420 (J3Q17_02420) - 466334..467068 (-) 735 WP_002874368.1 S24 family peptidase -
  J3Q17_RS08725 - 467180..467398 (+) 219 WP_002826741.1 hypothetical protein -
  J3Q17_RS02425 (J3Q17_02425) - 467560..467925 (-) 366 WP_002874369.1 hypothetical protein -
  J3Q17_RS02430 (J3Q17_02430) - 467968..468969 (+) 1002 WP_052805132.1 hypothetical protein -
  J3Q17_RS02435 (J3Q17_02435) - 468980..469630 (+) 651 WP_002871222.1 hypothetical protein -
  J3Q17_RS02440 (J3Q17_02440) - 469648..470028 (+) 381 WP_002788333.1 hypothetical protein -

Sequence

Protein


Download         Length: 216 a.a.        Molecular weight: 25465.05 Da        Isoelectric Point: 10.0165

>NTDB_id=477682 J3Q17_RS02405 WP_002874366.1 464451..465101(-) (CJE0566) [Campylobacter jejuni strain R12]
MKKLIILPLLSTLALADYTQYKPSEDFAKYFTKQNCSQVLDKFYYLNCYDYNYKGTKAVAYRLEADNLKGEQIKKRPRFE
DDTNIPKKYRTTWSDYKNSGYDRGHTLSNASMRKTTQAQRSTFLMSNITPQNPQINQRVWNKIEKRERQVALKLGSLEVL
NLVNYDNNPQRIRNQIAIPSSYIKIIKGNNFKECYKVPNYEVDNLSIKRYKFNCDG

Nucleotide


Download         Length: 651 bp        

>NTDB_id=477682 J3Q17_RS02405 WP_002874366.1 464451..465101(-) (CJE0566) [Campylobacter jejuni strain R12]
ATGAAAAAACTTATAATCTTACCATTGTTATCCACTCTAGCCTTAGCTGATTATACACAATACAAACCAAGTGAAGATTT
TGCTAAGTATTTTACTAAGCAAAACTGCTCACAAGTTTTAGATAAATTCTATTATCTAAATTGCTATGATTATAATTATA
AAGGCACTAAAGCCGTAGCTTATAGATTAGAAGCGGATAATTTAAAAGGTGAACAAATCAAAAAACGCCCACGCTTTGAA
GATGATACAAATATACCTAAAAAATACCGCACTACATGGAGTGATTATAAAAACAGCGGTTATGATAGAGGGCACACTCT
TTCTAATGCTTCAATGAGAAAAACAACTCAAGCTCAAAGAAGCACTTTTTTAATGAGTAATATTACTCCGCAAAATCCAC
AGATCAATCAAAGGGTTTGGAACAAGATTGAAAAAAGAGAAAGACAAGTAGCTTTAAAGCTTGGAAGTTTAGAAGTTTTA
AATTTGGTTAATTATGATAATAATCCACAAAGAATAAGAAATCAAATTGCTATTCCAAGCTCTTATATCAAGATTATAAA
AGGTAATAATTTTAAAGAATGCTATAAAGTTCCAAATTATGAAGTCGATAATTTAAGTATAAAAAGATATAAGTTTAATT
GTGATGGATAA

Domains

Predicted by InterProScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(27-209)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

90.698

99.537

0.903
  CJE1441 Campylobacter jejuni RM1221

90.233

99.537

0.898