Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   H7786_RS02610 Genome accession   NZ_CP060649
Coordinates   499591..500400 (+) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY270     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 494591..505400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7786_RS02590 (H7786_02625) - 495033..496280 (+) 1248 WP_014407393.1 AMP-binding protein -
  H7786_RS02595 (H7786_02630) - 496336..497370 (+) 1035 WP_174147118.1 DUF3114 domain-containing protein -
  H7786_RS02600 (H7786_02635) vicR 497532..498242 (+) 711 WP_002985645.1 response regulator YycF Regulator
  H7786_RS02605 (H7786_02640) vicK 498235..499587 (+) 1353 WP_030126091.1 cell wall metabolism sensor histidine kinase VicK Regulator
  H7786_RS02610 (H7786_02645) vicX 499591..500400 (+) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  H7786_RS02615 (H7786_02650) rnc 500843..501535 (+) 693 WP_002990670.1 ribonuclease III -
  H7786_RS02620 (H7786_02655) smc 501536..505075 (+) 3540 WP_030126090.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=477525 H7786_RS02610 WP_002985641.1 499591..500400(+) (vicX) [Streptococcus pyogenes strain TSPY270]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=477525 H7786_RS02610 WP_002985641.1 499591..500400(+) (vicX) [Streptococcus pyogenes strain TSPY270]
ATGAATGAGAGTGGTTTTAAATACAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758