Detailed information NTG0477389

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: J3P57_RS05545
• Genome accession: NZ_CP071519
• Coordinates: 1085190..1086149 (+)
• Length: 319 a.a.
• NCBI ID: WP_002856368.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain RM1245
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1080190..1091149

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J3P57_RS05520 (J3P57_05520)	neuB	1080688..1081728 (+)	1041	WP_002870496.1	N-acetylneuraminate synthase	-
J3P57_RS05525 (J3P57_05525)	neuC	1081725..1082843 (+)	1119	WP_002911676.1	UDP-N-acetylglucosamine 2-epimerase	-
J3P57_RS05530 (J3P57_05530)	-	1082840..1083505 (+)	666	WP_002855897.1	acylneuraminate cytidylyltransferase family protein	-
J3P57_RS05535 (J3P57_05535)	-	1083493..1084326 (+)	834	WP_002855772.1	CatB-related O-acetyltransferase	-
J3P57_RS05540 (J3P57_05540)	waaV	1084318..1085131 (-)	814	Protein_1077	glycosyltransferase family 2 protein	-
J3P57_RS05545 (J3P57_05545)	waaF	1085190..1086149 (+)	960	WP_002856368.1	lipopolysaccharide heptosyltransferase II	Regulator
J3P57_RS05550 (J3P57_05550)	gmhA	1086130..1086690 (-)	561	WP_002855785.1	D-sedoheptulose 7-phosphate isomerase	-
J3P57_RS05555 (J3P57_05555)	rfaE1	1086687..1088072 (-)	1386	WP_207497364.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
J3P57_RS05560 (J3P57_05560)	rfaD	1088065..1089018 (-)	954	WP_002856483.1	ADP-glyceromanno-heptose 6-epimerase	-
J3P57_RS05565 (J3P57_05565)	gmhB	1089019..1089579 (-)	561	WP_002911679.1	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
J3P57_RS05570 (J3P57_05570)	-	1089661..1089963 (+)	303	WP_002852762.1	cytochrome c	-
J3P57_RS05575 (J3P57_05575)	ccoS	1089986..1090192 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36719.17 Da
• Isoelectric Point: 10.1941

>NTDB_id=477389 J3P57_RS05545 WP_002856368.1 1085190..1086149(+) (waaF) [Campylobacter jejuni strain RM1245]
MKIFIHLPTWLGDAVMASPALYAIKEHFKDAQFILYGSLVSTALFKEFPNSKIIIENKQSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLDIKAHFKDLKLPFKLKFQNPLILKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKAEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTNFTQTSPWQNENAKLVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHL

Nucleotide

• Length: 960 bp

>NTDB_id=477389 J3P57_RS05545 WP_002856368.1 1085190..1086149(+) (waaF) [Campylobacter jejuni strain RM1245]
ATGAAAATTTTTATACACCTTCCAACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACGCTATAAAAGAACA
CTTTAAAGATGCCCAGTTTATCCTTTATGGCTCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACAATCCCGTTATAAACAAGCCCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTCAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTGACATAAAAGCTCATTTTAAAGACTTAA
AACTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTATCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAAGCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCCACAAATTTTACCCAAACTTCACC
TTGGCAAAATGAAAACGCAAAATTAGTACATTTAGATCTAGCTTGCATGCCTTGTATGCAAAAAACCTGTCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCTATGA

Domains

Predicted by InterProScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (95-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	95.611	100	0.956