Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   H7789_RS07010 Genome accession   NZ_CP060646
Coordinates   1424827..1425636 (-) Length   269 a.a.
NCBI ID   WP_136022319.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1026     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1419827..1430636
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7789_RS07000 (H7789_06995) smc 1420151..1423690 (-) 3540 WP_136261081.1 chromosome segregation protein SMC -
  H7789_RS07005 (H7789_07000) rnc 1423691..1424383 (-) 693 WP_002990670.1 ribonuclease III -
  H7789_RS07010 (H7789_07005) vicX 1424827..1425636 (-) 810 WP_136022319.1 MBL fold metallo-hydrolase Regulator
  H7789_RS07015 (H7789_07010) vicK 1425640..1426992 (-) 1353 WP_002995609.1 cell wall metabolism sensor histidine kinase VicK Regulator
  H7789_RS07020 (H7789_07015) vicR 1426985..1427695 (-) 711 WP_002985645.1 response regulator YycF Regulator
  H7789_RS07025 (H7789_07020) - 1427857..1428891 (-) 1035 WP_172448831.1 DUF3114 domain-containing protein -
  H7789_RS07030 (H7789_07025) - 1428947..1430194 (-) 1248 WP_002995606.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30125.23 Da        Isoelectric Point: 5.5314

>NTDB_id=477374 H7789_RS07010 WP_136022319.1 1424827..1425636(-) (vicX) [Streptococcus pyogenes strain TSPY1026]
MNESSFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=477374 H7789_RS07010 WP_136022319.1 1424827..1425636(-) (vicX) [Streptococcus pyogenes strain TSPY1026]
ATGAATGAGAGTAGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.465

100

0.755