Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   NMV_RS02245 Genome accession   NC_017501
Coordinates   423880..424524 (+) Length   214 a.a.
NCBI ID   WP_014573787.1    Uniprot ID   A0A9K2KMP0
Organism   Neisseria meningitidis 8013     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 418880..429524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMV_RS02220 (NMV_0444) putP 419067..420593 (-) 1527 WP_002242311.1 sodium/proline symporter PutP -
  NMV_RS16060 - 420898..421023 (-) 126 WP_256998697.1 hypothetical protein -
  NMV_RS02230 (NMV_0446) - 421078..421398 (+) 321 WP_012222001.1 accessory factor UbiK family protein -
  NMV_RS02235 (NMV_0447) comM 421412..422908 (+) 1497 WP_002229025.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  NMV_RS02240 (NMV_0448) ftsN 423014..423877 (+) 864 WP_173277143.1 cell division protein FtsN -
  NMV_RS02245 (NMV_0449) dsbA1 423880..424524 (+) 645 WP_014573787.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMV_RS02250 (NMV_0450) - 424557..425378 (+) 822 WP_002232816.1 undecaprenyl-diphosphate phosphatase -
  NMV_RS02265 (NMV_0451) - 425960..427150 (-) 1191 WP_162466991.1 class I SAM-dependent methyltransferase -
  NMV_RS02270 (NMV_0452) mraZ 427456..427911 (+) 456 WP_002218779.1 division/cell wall cluster transcriptional repressor MraZ -
  NMV_RS02275 (NMV_0453) rsmH 427908..428894 (+) 987 WP_014573789.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  NMV_RS02280 (NMV_0454) ftsL 428891..429154 (+) 264 WP_002232818.1 cell division protein FtsL -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23964.00 Da        Isoelectric Point: 9.8294

>NTDB_id=47733 NMV_RS02245 WP_014573787.1 423880..424524(+) (dsbA1) [Neisseria meningitidis 8013]
MKLKHLLPLLLSAVLSAQAYALTEREDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYGIDSTPTVIVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQPPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=47733 NMV_RS02245 WP_014573787.1 423880..424524(+) (dsbA1) [Neisseria meningitidis 8013]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAAGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGCAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAATTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCTGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCTGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATACGGTATTGACAGCACGCCGACCGTTATTGTCGGCGGAAAATACCGCGTTATCTTCAATAATGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGCCCCCTGCTGTACAGA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.684

87.383

0.495
  dsbA2 Neisseria meningitidis MC58

51.075

86.916

0.444

Multiple sequence alignment