Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   NMV_RS01645 Genome accession   NC_017501
Coordinates   311272..311967 (+) Length   231 a.a.
NCBI ID   WP_014573749.1    Uniprot ID   -
Organism   Neisseria meningitidis 8013     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 306272..316967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMV_RS01625 (NMV_0323) - 306789..307700 (-) 912 WP_002223351.1 LysR family transcriptional regulator -
  NMV_RS01630 (NMV_0325) - 307808..308206 (+) 399 WP_002216361.1 DoxX family protein -
  NMV_RS01635 (NMV_0326) - 308255..308860 (+) 606 WP_014573747.1 nitroreductase family protein -
  NMV_RS01640 (NMV_0327) - 309046..311157 (+) 2112 WP_014573748.1 TonB-dependent receptor -
  NMV_RS01645 (NMV_0328) dsbA2 311272..311967 (+) 696 WP_014573749.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMV_RS01650 (NMV_0329) ffh 312298..313668 (-) 1371 WP_002234520.1 signal recognition particle protein -
  NMV_RS01655 (NMV_0330) - 313888..314694 (+) 807 WP_013449598.1 cytochrome C assembly family protein -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25402.96 Da        Isoelectric Point: 5.3625

>NTDB_id=47727 NMV_RS01645 WP_014573749.1 311272..311967(+) (dsbA2) [Neisseria meningitidis 8013]
MKLKTLALTSLTLLALAACSKQAETSVPADSVQSSSSAPAAPAPLTEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=47727 NMV_RS01645 WP_014573749.1 311272..311967(+) (dsbA2) [Neisseria meningitidis 8013]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGCGT
TCCGGCAGACAGCGTCCAAAGCAGCTCATCTGCTCCGGCAGCCCCAGCCCCATTGACCGAAGGCGTGAACTACACTGTAT
TGTCCACGCCTATCCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

98.701

100

0.987

  dsbA1 Neisseria meningitidis MC58

70.815

100

0.714


Multiple sequence alignment