Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   NMV_RS01535 Genome accession   NC_017501
Coordinates   283980..284678 (+) Length   232 a.a.
NCBI ID   WP_014573739.1    Uniprot ID   A0A9K2KN56
Organism   Neisseria meningitidis 8013     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 278980..289678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMV_RS01520 (NMV_0301) trpC 280065..280847 (-) 783 WP_014573738.1 indole-3-glycerol phosphate synthase TrpC -
  NMV_RS01525 (NMV_0302) - 280896..281852 (-) 957 WP_002231637.1 YheT family hydrolase -
  NMV_RS01530 (NMV_0303) murJ 281985..283523 (-) 1539 WP_002231639.1 murein biosynthesis integral membrane protein MurJ -
  NMV_RS16155 - 283577..283687 (+) 111 Protein_278 IS5/IS1182 family transposase -
  NMV_RS01535 (NMV_0304) dsbA1 283980..284678 (+) 699 WP_014573739.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMV_RS01540 (NMV_0305) amgK 284735..285739 (-) 1005 WP_002239466.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  NMV_RS01545 (NMV_0306) - 285809..288217 (+) 2409 WP_048813388.1 LPS-assembly protein LptD -
  NMV_RS01550 (NMV_0307) - 288322..289383 (+) 1062 WP_012222056.1 peptidylprolyl isomerase -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 25273.85 Da        Isoelectric Point: 5.6016

>NTDB_id=47726 NMV_RS01535 WP_014573739.1 283980..284678(+) (dsbA1) [Neisseria meningitidis 8013]
MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAH
LEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAH

Nucleotide


Download         Length: 699 bp        

>NTDB_id=47726 NMV_RS01535 WP_014573739.1 283980..284678(+) (dsbA1) [Neisseria meningitidis 8013]
ATGAAATCCAGACACCTCGCCCTCGGCGTTGCCGCCCTGTTCGCCCTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGGCTGGTCGAAGGGCAAAACTATACCGTCCTTG
CCAACCCGATTCCCCAACAGCAGGCAGGCAAAGTCGAAGTCCTTGAGTTTTTCGGCTATTTCTGTCCGCACTGCGCCCAC
CTCGAACCTGTTTTAAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACATGTCGTTTGGCAAAA
AGAAATGCTGACGCTGGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGACAGCAAAGATGTGGCGAACAGCCATA
TTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCC
TTTGACGGCAAAAAAGTCCTTGCCGCTTACGAATCTCCCGAAAGCCAGGCGCGCGCCGACAAAATGCAGGAGCTGACCGA
AACCTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGTCCGGTA
TGAACACCATCGACCTTTTGGCGGACAAAGTACGCGAAGAACAAAAAGCCGCGCACTAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(63-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

99.138

100

0.991
  dsbA2 Neisseria meningitidis MC58

76.882

80.172

0.616

Multiple sequence alignment