Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   H7793_RS07040 Genome accession   NZ_CP060642
Coordinates   1409749..1410558 (-) Length   269 a.a.
NCBI ID   WP_002985641.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY1312     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1404749..1415558
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7793_RS07030 (H7793_07040) smc 1405074..1408613 (-) 3540 WP_032460081.1 chromosome segregation protein SMC -
  H7793_RS07035 (H7793_07045) rnc 1408614..1409306 (-) 693 WP_002990670.1 ribonuclease III -
  H7793_RS07040 (H7793_07050) vicX 1409749..1410558 (-) 810 WP_002985641.1 MBL fold metallo-hydrolase Regulator
  H7793_RS07045 (H7793_07055) vicK 1410562..1411914 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  H7793_RS07050 (H7793_07060) vicR 1411907..1412617 (-) 711 WP_002985645.1 response regulator YycF Regulator
  H7793_RS07055 (H7793_07065) - 1412779..1413813 (-) 1035 WP_161632212.1 DUF3114 domain-containing protein -
  H7793_RS07060 (H7793_07070) - 1413869..1415116 (-) 1248 WP_011284594.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30095.20 Da        Isoelectric Point: 5.5314

>NTDB_id=477158 H7793_RS07040 WP_002985641.1 1409749..1410558(-) (vicX) [Streptococcus pyogenes strain TSPY1312]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=477158 H7793_RS07040 WP_002985641.1 1409749..1410558(-) (vicX) [Streptococcus pyogenes strain TSPY1312]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.836

100

0.758