Detailed information NTG0477160

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: J1G47_RS05930
• Genome accession: NZ_CP071487
• Coordinates: 1185143..1187971 (-)
• Length: 942 a.a.
• NCBI ID: WP_207326498.1
• Uniprot ID: -
• Organism: Glaesserella parasuis strain YHP1818
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1180143..1192971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J1G47_RS05920 (J1G47_05920)	-	1184461..1184712 (-)	252	WP_041603108.1	hypothetical protein	-
J1G47_RS05925 (J1G47_05925)	-	1184678..1185058 (-)	381	WP_010786782.1	YacL family protein	-
J1G47_RS05930 (J1G47_05930)	uvrA	1185143..1187971 (-)	2829	WP_207326498.1	excinuclease ABC subunit UvrA	Machinery gene
J1G47_RS05935 (J1G47_05935)	ssb	1188137..1188679 (+)	543	WP_021115958.1	single-stranded DNA-binding protein	Machinery gene
J1G47_RS05940 (J1G47_05940)	-	1188885..1190099 (+)	1215	WP_021114868.1	ATP-binding protein	-
J1G47_RS05945 (J1G47_05945)	-	1190171..1190422 (-)	252	Protein_1154	helicase HerA-like domain-containing protein	-
J1G47_RS05950 (J1G47_05950)	rhlB	1190489..1191709 (-)	1221	WP_207326499.1	ATP-dependent RNA helicase RhlB	-
J1G47_RS05955 (J1G47_05955)	-	1191773..1192045 (-)	273	WP_005712616.1	HigA family addiction module antitoxin	-
J1G47_RS05960 (J1G47_05960)	-	1192056..1192334 (-)	279	WP_012621703.1	type II toxin-antitoxin system RelE/ParE family toxin	-

Sequence

Protein

• Length: 942 a.a.
• Molecular weight: 104575.13 Da
• Isoelectric Point: 6.7392

>NTDB_id=477160 J1G47_RS05930 WP_207326498.1 1185143..1187971(-) (uvrA) [Glaesserella parasuis strain YHP1818]
MQHIDIRGARTHNLKNVNLVLPRDKFIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTVTEIHDYLRLLFARVGEPRCPDHDVPLAAQTISQMVDRVLEEPEGKRLMLLSPVVKDRKG
EHAKLLENLTANGYIRARIDGEICDLSDPPKLELQKKHTIEVVIDRFKVRSDIATRLAQSFETALELSGSTAIIADMDDP
NAEELVFSSSFACSHCGYSLTELEPRLFSFNNPAGACPTCDGLGVQQYFDERKVVQNPDMSLASGAIKGWDRRSFYYFGL
LKSVAKHYDFDIEMPFNQLPKKIQNIILNGSKDEIEFVYVNDRGDSVKRVHTFEGVLNNMARRYKETESNAVREELAKYI
NNRTCTDCEGSRLRREARYVFLEKTNLPMVSEKSIGEALEFFEGLHLSGQKAQIAEKILKEIRERLSFLVNVGLNYLSLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDAIMVADHIVDIG
PGAGVHGGQIIAQGTAQEIMQNEASITGKFLSGKEKIEIPKQRTPRDESKQLVLKGASGNNLKEVDLAIPVGLFTCITGV
SGSGKSTLINDTLFPIAQNALNRAENSDVAPYKSIDGLAHFDKVIDINQSPIGRTPRSNPATYTGLFTPIRELFAGTQEA
RARGYTVGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDHCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFFD
AVPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLAAELSKRDTGKTLYILDEPTTGLHFADIKQLLTVLHRLRDQ
GNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGQIIAEGTPEEVAKDKKSHTARFLNEILKKK

Nucleotide

• Length: 2829 bp

>NTDB_id=477160 J1G47_RS05930 WP_207326498.1 1185143..1187971(-) (uvrA) [Glaesserella parasuis strain YHP1818]
ATGCAACATATTGATATTCGTGGGGCGAGAACCCACAATTTAAAAAACGTGAATTTGGTTCTTCCGAGAGATAAATTTAT
TGTGATTACAGGGTTGTCAGGGTCAGGCAAATCGTCTTTGGCTTTTGATACTCTTTATGCTGAAGGGCAACGTCGTTATG
TGGAAAGTTTATCCGCTTATGCTCGTCAGTTCTTATCTTTGATGGAAAAGCCTGATGTCGATCACATTGAAGGGCTTTCC
CCTGCGATTTCAATTGAGCAGAAATCTACCTCGCACAATCCTCGTTCTACGGTAGGGACGGTGACGGAAATCCACGATTA
TTTGCGTTTGTTGTTTGCCCGTGTGGGCGAGCCTCGCTGTCCTGATCACGATGTGCCGTTAGCGGCTCAGACAATTTCGC
AAATGGTGGATAGAGTGCTGGAAGAACCTGAAGGTAAGCGTTTGATGTTGCTTTCTCCTGTGGTGAAAGATCGTAAAGGT
GAACACGCAAAATTATTAGAAAATCTGACCGCTAATGGTTATATCCGTGCCAGAATTGATGGGGAAATTTGTGATCTGTC
CGATCCGCCAAAACTTGAATTGCAGAAAAAACATACGATTGAAGTGGTGATTGATCGTTTTAAAGTGCGTAGCGATATTG
CGACCCGTTTAGCGCAGTCCTTTGAAACGGCATTGGAACTCTCAGGTTCAACAGCGATTATTGCCGATATGGACGATCCA
AATGCAGAAGAGTTAGTGTTTTCGTCGAGTTTTGCTTGCTCTCACTGTGGCTATTCGCTGACGGAATTAGAGCCACGTCT
TTTCTCGTTTAATAATCCTGCTGGGGCTTGCCCAACTTGTGATGGTTTGGGAGTTCAGCAATATTTTGATGAACGTAAAG
TGGTGCAAAATCCTGATATGTCCTTAGCAAGCGGTGCGATTAAGGGCTGGGATCGCCGTAGTTTCTACTATTTCGGTTTG
TTGAAATCAGTGGCGAAACATTATGATTTTGATATTGAAATGCCGTTTAATCAGTTACCGAAGAAAATTCAAAATATCAT
TTTAAATGGTTCAAAAGATGAAATTGAATTTGTCTATGTGAATGATCGGGGTGATAGCGTTAAGCGAGTTCACACTTTTG
AAGGGGTGCTGAATAATATGGCTCGTCGTTATAAGGAAACCGAGTCAAATGCAGTGCGTGAAGAGCTGGCTAAATATATT
AATAATCGTACTTGTACCGATTGTGAAGGCTCTCGTTTACGTCGTGAAGCCCGTTATGTCTTTTTAGAGAAAACCAACTT
GCCGATGGTGTCGGAAAAAAGTATCGGCGAAGCCTTAGAATTTTTTGAAGGCTTACATCTATCTGGGCAGAAAGCACAAA
TTGCGGAAAAAATTCTCAAAGAGATCCGTGAGCGTTTGTCTTTCCTTGTCAATGTTGGGTTGAACTACCTTTCGCTCTCT
CGTTCGGCAGAAACCTTATCAGGCGGTGAAGCCCAACGTATTCGCCTTGCCAGCCAAATCGGTGCTGGGTTAGTGGGGGT
GATGTATGTGCTTGATGAACCGTCTATTGGCTTGCACCAACGAGATAACGAACGTTTATTGAACACTCTTATTCATCTTC
GGAATTTGGGTAATACAGTGATTGTGGTTGAACACGATGAAGATGCGATTATGGTGGCAGATCATATTGTCGATATTGGA
CCAGGGGCAGGGGTACACGGCGGTCAGATTATTGCTCAAGGCACAGCTCAAGAAATTATGCAAAATGAAGCATCGATTAC
GGGTAAATTCTTATCTGGTAAGGAAAAAATCGAGATCCCGAAACAGCGTACCCCACGAGATGAAAGCAAACAGCTGGTGT
TAAAAGGAGCAAGCGGTAATAACTTAAAAGAAGTCGATTTAGCTATTCCTGTTGGCTTGTTTACTTGTATTACAGGGGTA
TCGGGTTCGGGCAAATCCACCTTAATTAACGATACCTTATTCCCGATTGCTCAAAATGCGTTAAATCGTGCAGAAAACAG
CGATGTCGCCCCTTATAAGAGCATTGATGGCTTGGCACATTTCGATAAAGTAATCGACATCAATCAAAGTCCGATTGGAC
GTACTCCACGTTCAAACCCTGCGACTTACACTGGATTATTTACCCCGATCCGTGAACTCTTTGCAGGCACTCAGGAAGCA
AGGGCAAGGGGTTACACTGTCGGACGTTTCAGCTTTAACGTGCGTGGCGGACGTTGTGAAGCCTGCCAAGGTGACGGGGT
GATCAAAGTTGAAATGCACTTCTTACCTGATGTATATGTGCCGTGCGACCACTGTAAAGGCAAACGCTATAACCGTGAAA
CCCTTGAAATTCGCTATAAAGGCAAAACCATTCATCAGGTGTTAGATATGACCGTGGAAGAAGCGCGTGAGTTTTTTGAT
GCCGTGCCGATGATTGCTCGTAAGTTACAGACTTTGATGGACGTAGGCTTATCCTATATCCGTTTAGGGCAATCTTCTAC
CACCCTATCAGGTGGTGAAGCTCAACGGGTGAAACTGGCGGCGGAATTATCTAAACGTGATACGGGCAAAACCCTCTATA
TTCTTGATGAACCAACGACGGGATTGCACTTCGCCGACATTAAACAATTATTGACCGTATTACACCGCTTGCGTGATCAA
GGAAATACCATTGTGGTGATCGAGCATAACTTAGATGTGATCAAAACCGCAGACTGGATTGTCGATTTAGGCCCAGAAGG
CGGTAGCGGCGGCGGACAGATTATCGCTGAAGGTACACCTGAAGAGGTGGCAAAAGATAAGAAATCCCATACGGCACGTT
TTTTAAACGAAATCTTAAAAAAGAAATAA

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (290-398)

• UvrA interaction domain (UvrA_inter) (130-237)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.036	99.575	0.568
uvrA	Streptococcus pneumoniae TIGR4	57.036	99.575	0.568
uvrA	Streptococcus pneumoniae D39	57.036	99.575	0.568