Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   H7798_RS00265 Genome accession   NZ_CP060638
Coordinates   47934..48032 (+) Length   32 a.a.
NCBI ID   WP_020833188.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY141     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 42934..53032
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7798_RS00245 (H7798_00250) purK 42996..44069 (+) 1074 WP_030126530.1 5-(carboxyamino)imidazole ribonucleotide synthase -
  H7798_RS00250 (H7798_00255) - 44071..45489 (+) 1419 WP_011888524.1 hypothetical protein -
  H7798_RS00255 (H7798_00260) purB 45509..46801 (+) 1293 WP_111717783.1 adenylosuccinate lyase -
  H7798_RS00260 (H7798_00265) comR 46932..47843 (+) 912 WP_020904818.1 helix-turn-helix domain-containing protein Regulator
  H7798_RS00265 comS 47934..48032 (+) 99 WP_020833188.1 quorum-sensing system DWW-type pheromone Regulator
  H7798_RS00270 (H7798_00270) ruvB 48063..49061 (+) 999 WP_011054100.1 Holliday junction branch migration DNA helicase RuvB -
  H7798_RS00275 (H7798_00275) - 49199..49636 (+) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  H7798_RS00280 (H7798_00280) - 49659..50060 (+) 402 WP_002986671.1 MORN repeat-containing protein -
  H7798_RS00285 (H7798_00285) - 50057..51832 (+) 1776 WP_002987732.1 acyltransferase family protein -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3758.63 Da        Isoelectric Point: 10.7919

>NTDB_id=476904 H7798_RS00265 WP_020833188.1 47934..48032(+) (comS) [Streptococcus pyogenes strain TSPY141]
MLKKVKPFLLLAAVVAFKVARVMHEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=476904 H7798_RS00265 WP_020833188.1 47934..48032(+) (comS) [Streptococcus pyogenes strain TSPY141]
ATGTTAAAAAAAGTTAAGCCATTTTTACTATTAGCCGCAGTAGTTGCATTTAAAGTTGCTCGTGTAATGCATGAATTTGA
TTGGTGGAATCTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

100

100

1
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437