Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   LLH_RS03075 Genome accession   NC_017492
Coordinates   614374..615075 (+) Length   233 a.a.
NCBI ID   WP_011676802.1    Uniprot ID   A0A0M2ZUZ8
Organism   Lactococcus cremoris subsp. cremoris A76     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 609374..620075
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LLH_RS03060 (llh_3155) - 611771..612679 (+) 909 WP_014572147.1 diacylglycerol kinase family protein -
  LLH_RS03065 (llh_3160) - 612825..613511 (+) 687 WP_014572148.1 amino acid ABC transporter permease -
  LLH_RS03070 (llh_3165) - 613511..614245 (+) 735 WP_014572149.1 amino acid ABC transporter ATP-binding protein -
  LLH_RS03075 (llh_3170) mecA 614374..615075 (+) 702 WP_011676802.1 adaptor protein MecA Regulator
  LLH_RS03080 (llh_3175) - 615078..616403 (+) 1326 WP_014572150.1 MraY family glycosyltransferase -
  LLH_RS03085 (llh_3180) sufC 616579..617349 (+) 771 WP_011676800.1 Fe-S cluster assembly ATPase SufC -
  LLH_RS03090 (llh_3185) sufD 617489..618745 (+) 1257 WP_011676799.1 Fe-S cluster assembly protein SufD -
  LLH_RS03095 (llh_3190) - 618745..619962 (+) 1218 WP_014572151.1 cysteine desulfurase -

Sequence


Protein


Download         Length: 233 a.a.        Molecular weight: 27046.46 Da        Isoelectric Point: 4.1802

>NTDB_id=47683 LLH_RS03075 WP_011676802.1 614374..615075(+) (mecA) [Lactococcus cremoris subsp. cremoris A76]
MKYEDINENTIKITLSFDDLTDYDIKLSDFFGNQEVIEQFFYELVDELGLENRFGNVGMLTFQIQPFPQGVHMIVHEEAM
LGEGGEIPDDPEEFEELMTGFYNKLNEIGADMARERGITDFKPGLGLPGAKKEEAEHEPDFIYYSIRYDDMMSVLTGIKN
VKFADEESEFYRYDGNFYLVVLDNQKAKGKMHVESTRSRMMEYGEATKMSREFLQEYGECLITTRALDVLRKI

Nucleotide


Download         Length: 702 bp        

>NTDB_id=47683 LLH_RS03075 WP_011676802.1 614374..615075(+) (mecA) [Lactococcus cremoris subsp. cremoris A76]
ATGAAGTATGAGGATATAAATGAAAACACTATAAAAATCACCTTGTCTTTTGATGATTTGACAGATTATGATATCAAGTT
ATCTGACTTTTTTGGAAATCAAGAAGTCATTGAACAATTTTTCTATGAATTAGTTGATGAACTTGGCTTAGAAAATCGTT
TTGGAAATGTAGGGATGTTAACTTTCCAAATTCAACCCTTCCCACAAGGCGTCCATATGATTGTTCATGAAGAAGCAATG
TTGGGTGAAGGCGGAGAGATTCCAGATGATCCTGAAGAATTTGAAGAATTAATGACTGGTTTTTATAATAAATTAAATGA
AATAGGGGCAGATATGGCGCGCGAGCGAGGAATTACTGATTTTAAACCTGGACTTGGTTTACCAGGGGCTAAAAAAGAAG
AAGCCGAACATGAGCCAGACTTTATATACTACTCTATTCGTTATGATGACATGATGTCTGTCTTGACTGGAATAAAAAAT
GTGAAATTCGCAGATGAAGAGTCAGAATTTTATCGTTATGATGGTAATTTTTATCTTGTTGTTTTAGATAATCAAAAAGC
AAAAGGTAAAATGCATGTTGAAAGCACACGTTCACGGATGATGGAATATGGTGAAGCGACAAAAATGAGTCGAGAATTTT
TGCAGGAGTATGGTGAATGCCTAATCACAACGCGTGCTTTAGACGTTCTTAGAAAAATCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0M2ZUZ8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Lactococcus lactis subsp. cremoris KW2

100

100

1

  mecA Lactococcus lactis subsp. lactis strain DGCC12653

96.567

100

0.966


Multiple sequence alignment