Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   JZY07_RS05490 Genome accession   NZ_CP071305
Coordinates   1089046..1089714 (+) Length   222 a.a.
NCBI ID   WP_024412109.1    Uniprot ID   -
Organism   Streptococcus suis strain SC183     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1084046..1094714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZY07_RS05450 (JZY07_05450) - 1084164..1084301 (+) 138 WP_169050553.1 hypothetical protein -
  JZY07_RS05455 (JZY07_05455) - 1084314..1085048 (+) 735 WP_024412114.1 TraX family protein -
  JZY07_RS05460 (JZY07_05460) - 1085147..1085287 (+) 141 WP_032497796.1 hypothetical protein -
  JZY07_RS05465 (JZY07_05465) - 1085300..1085689 (+) 390 WP_024412113.1 NisI/SpaI family lantibiotic immunity lipoprotein -
  JZY07_RS05470 (JZY07_05470) - 1085698..1086450 (+) 753 WP_024412112.1 ABC transporter ATP-binding protein -
  JZY07_RS05475 (JZY07_05475) - 1086451..1088421 (+) 1971 WP_024412111.1 FtsX-like permease family protein -
  JZY07_RS05480 (JZY07_05480) - 1088512..1088751 (+) 240 WP_015646833.1 DUF6290 family protein -
  JZY07_RS05485 (JZY07_05485) - 1088741..1089007 (+) 267 WP_024412110.1 type II toxin-antitoxin system RelE/ParE family toxin -
  JZY07_RS05490 (JZY07_05490) braR 1089046..1089714 (+) 669 WP_024412109.1 response regulator transcription factor Regulator
  JZY07_RS05495 (JZY07_05495) - 1089711..1090652 (+) 942 WP_024412108.1 sensor histidine kinase -
  JZY07_RS05500 (JZY07_05500) - 1090728..1092236 (+) 1509 WP_024412107.1 phosphoglucomutase -
  JZY07_RS05505 (JZY07_05505) xerS 1092299..1093369 (-) 1071 WP_024412106.1 tyrosine recombinase XerS Machinery gene

Sequence

Protein


Download         Length: 222 a.a.        Molecular weight: 25567.39 Da        Isoelectric Point: 4.7736

>NTDB_id=476694 JZY07_RS05490 WP_024412109.1 1089046..1089714(+) (braR) [Streptococcus suis strain SC183]
MMKKEKIYIVEDDEMIVQLLKQHLGKSYQVESVQNFRAVSQEVAEIKPDLVLMDISLPYYNGFYWTTEIRKTMTMPIIFI
SSSDDEMNAVMAMNMGGDDFVSKPFSLGILDAKIGAFLRRVNQFSKTTDLSIDQFQLSLDGRFSSESEQVQLSPTETKIL
STLLERQGQIVSKDELLEKLWENEEFIDQNTLNVNMTRLRKKVSEVGFERIHTVRGVGYLVK

Nucleotide


Download         Length: 669 bp        

>NTDB_id=476694 JZY07_RS05490 WP_024412109.1 1089046..1089714(+) (braR) [Streptococcus suis strain SC183]
ATGATGAAAAAAGAAAAGATTTATATTGTTGAAGATGATGAGATGATTGTCCAACTCTTGAAGCAACATTTGGGCAAATC
TTATCAGGTAGAAAGTGTGCAGAATTTCCGAGCTGTCAGTCAGGAAGTGGCGGAAATCAAACCAGACTTGGTGCTGATGG
ACATTAGCCTACCCTATTATAACGGCTTTTATTGGACAACGGAAATCCGTAAAACCATGACCATGCCCATTATCTTTATC
TCCTCTAGCGATGACGAGATGAATGCGGTCATGGCTATGAACATGGGAGGCGATGATTTTGTGTCCAAGCCTTTTTCACT
GGGGATTTTGGATGCCAAAATCGGTGCCTTCCTGCGTCGAGTCAATCAATTCAGCAAAACAACTGACTTGTCGATCGACC
AGTTCCAGCTTAGTTTGGATGGGCGTTTTTCAAGCGAATCGGAACAGGTTCAATTGTCTCCTACAGAAACCAAGATTTTA
TCCACCTTACTAGAACGACAAGGGCAGATTGTCAGCAAGGATGAACTCTTGGAAAAACTCTGGGAAAATGAAGAATTTAT
CGATCAGAATACGCTCAATGTAAACATGACCAGACTGCGTAAGAAGGTGAGCGAAGTCGGGTTTGAACGAATTCATACCG
TTCGTGGCGTGGGGTACTTGGTCAAATGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(7-112)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.273

99.099

0.468