Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   JZY07_RS02610 Genome accession   NZ_CP071305
Coordinates   496194..496928 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain SC183     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 491194..501928
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JZY07_RS02585 (JZY07_02585) - 491693..492001 (-) 309 WP_002938710.1 DUF1827 family protein -
  JZY07_RS02590 (JZY07_02590) - 492056..492517 (-) 462 WP_024399534.1 NUDIX hydrolase -
  JZY07_RS02595 (JZY07_02595) clpE 492702..494933 (-) 2232 WP_024399535.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  JZY07_RS02600 (JZY07_02600) - 495156..495386 (+) 231 WP_002938704.1 DUF1797 family protein -
  JZY07_RS02605 (JZY07_02605) - 495512..496201 (+) 690 WP_002938702.1 amino acid ABC transporter permease -
  JZY07_RS02610 (JZY07_02610) amiE 496194..496928 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  JZY07_RS02615 (JZY07_02615) - 497058..497906 (+) 849 WP_024399536.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  JZY07_RS02620 (JZY07_02620) - 499314..499613 (+) 300 WP_014735557.1 hypothetical protein -
  JZY07_RS02625 (JZY07_02625) lepB 499597..500205 (+) 609 WP_024399537.1 signal peptidase I -
  JZY07_RS02630 (JZY07_02630) - 500224..500610 (+) 387 WP_024399538.1 hypothetical protein -
  JZY07_RS02635 (JZY07_02635) - 500611..501000 (-) 390 Protein_473 transposase -
  JZY07_RS02640 (JZY07_02640) - 500968..501795 (+) 828 WP_024399539.1 class C sortase -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=476672 JZY07_RS02610 WP_002943067.1 496194..496928(+) (amiE) [Streptococcus suis strain SC183]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=476672 JZY07_RS02610 WP_002943067.1 496194..496928(+) (amiE) [Streptococcus suis strain SC183]
ATGTCTAATGCAATTATTTCTATCAAGGATTTACATAAATACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTGGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTACCGACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCGAATATGACGGTATTAGATAATATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCAGATAAGG
CGAATGCCTATCCACAAAGCCTTTCAGGTGGTCAGCAACAGCGGATCGCTATTGCACGTGGTCTGGCCATGGACCCAGAT
GTCCTACTTTTTGATGAACCAACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTTATGCAGGATTTGGC
TAAGTCAGGGATGACCATGGTTATTGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGTGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACCAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365