Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   JWY36_RS16205 Genome accession   NZ_CP071276
Coordinates   3018326..3019189 (-) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain JNFE0126     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3013326..3024189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JWY36_RS16170 (JWY36_16025) mrpE 3013494..3013970 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  JWY36_RS16175 (JWY36_16030) mrpF 3013970..3014254 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  JWY36_RS16180 (JWY36_16035) mnhG 3014238..3014612 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  JWY36_RS16185 (JWY36_16040) yuxO 3014651..3015031 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  JWY36_RS16190 (JWY36_16045) comA 3015050..3015694 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  JWY36_RS16195 (JWY36_16050) comP 3015775..3018087 (-) 2313 WP_014480703.1 sensor histidine kinase Regulator
  JWY36_RS16200 (JWY36_16055) comX 3018103..3018324 (-) 222 WP_014480704.1 competence pheromone ComX -
  JWY36_RS16205 (JWY36_16060) comQ 3018326..3019189 (-) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  JWY36_RS16210 (JWY36_16065) degQ 3019374..3019514 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  JWY36_RS16215 (JWY36_16070) - 3019736..3019861 (+) 126 WP_003228793.1 hypothetical protein -
  JWY36_RS16220 (JWY36_16075) - 3019975..3020343 (+) 369 WP_014477834.1 hypothetical protein -
  JWY36_RS16225 (JWY36_16080) pdeH 3020319..3021548 (-) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -
  JWY36_RS16230 (JWY36_16085) pncB 3021684..3023156 (-) 1473 WP_014480708.1 nicotinate phosphoribosyltransferase -
  JWY36_RS16235 (JWY36_16090) pncA 3023172..3023723 (-) 552 WP_014480709.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=476607 JWY36_RS16205 WP_014480705.1 3018326..3019189(-) (comQ) [Bacillus subtilis strain JNFE0126]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=476607 JWY36_RS16205 WP_014480705.1 3018326..3019189(-) (comQ) [Bacillus subtilis strain JNFE0126]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439