Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   JHY03_RS14755 Genome accession   NZ_CP071044
Coordinates   3376206..3377330 (+) Length   374 a.a.
NCBI ID   WP_031124035.1    Uniprot ID   A0A6N9VPB8
Organism   Streptomyces sp. CA-256286     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3371206..3382330
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JHY03_RS14740 (JHY03_29660) - 3371736..3372578 (+) 843 WP_207564324.1 hypothetical protein -
  JHY03_RS14745 (JHY03_29670) - 3372668..3374545 (-) 1878 WP_207564325.1 hypothetical protein -
  JHY03_RS14750 (JHY03_29680) radA/sms 3374703..3376124 (+) 1422 WP_055561464.1 DNA repair protein RadA Machinery gene
  JHY03_RS14755 (JHY03_29690) disA 3376206..3377330 (+) 1125 WP_031124035.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  JHY03_RS14760 (JHY03_29700) - 3377509..3378342 (-) 834 WP_233842058.1 hypothetical protein -
  JHY03_RS14765 (JHY03_29710) - 3378585..3379496 (+) 912 WP_031124033.1 A/G-specific adenine glycosylase -
  JHY03_RS14770 (JHY03_29720) - 3379652..3380377 (+) 726 WP_202705375.1 SigE family RNA polymerase sigma factor -
  JHY03_RS14775 (JHY03_29730) - 3380479..3381138 (+) 660 WP_032775725.1 hypothetical protein -
  JHY03_RS14780 (JHY03_29740) cseB 3381157..3381870 (+) 714 WP_207564326.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40376.32 Da        Isoelectric Point: 5.0230

>NTDB_id=475930 JHY03_RS14755 WP_031124035.1 3376206..3377330(+) (disA) [Streptomyces sp. CA-256286]
MAANDRAAAPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDRTVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDMTKILRAGVQLVPDASIHTEETGTRHRTADRVSKACGFPVVSVSQSMRLIALYVDGERRVLEESSA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=475930 JHY03_RS14755 WP_031124035.1 3376206..3377330(+) (disA) [Streptomyces sp. CA-256286]
GTGGCAGCCAACGACCGGGCGGCAGCGCCCGGAAAGTCCGGCCAAGGCACCGGCAACGAAGCGCTGATGCGCGCCTCGTT
GAGCGCGGTCGCACCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGGGGCAATACCGGCGGGCTGATCGTCC
TGGGCATGGACAGGACCGTCGAATCGATGTGTACCGGCGGGTTCGTGCTGGACGTGGAGTTCACCGCGACCCGACTGCGC
GAGCTGTGCAAGCTCGACGGGGCACTGATCCTCGACAAGGACATGACCAAGATCCTGCGGGCCGGTGTGCAGCTGGTCCC
GGACGCCTCGATCCACACGGAGGAGACGGGGACCCGTCACCGTACGGCGGACCGGGTCTCCAAGGCGTGCGGTTTCCCCG
TCGTCTCGGTCTCCCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCTCCGCG
ATCCTCTCCCGGGCCAATCAGGCGCTCGCCACCCTGGAGCGGTACAAGCTGCGCCTGGACGAGGTGGCCGGGACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTGACGGCGGTGGCGCAGCGGCTGGAGATGGTGCGGCGGATCG
CGACCGAGATCGCGGAGTACGTGGTCGAGCTCGGCACCGACGGACGGCTCCTCTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGGGAGCTGGTCGTCCGGGACTACGTGCCCGAGCCGACGGCGAAACGGTCACGCACGGTGGCGGA
GGCGCTGACCGAGCTGGACGCGCTGAGCCACACGGAGCTGCTGGAGCTGCCGGTGGTGGCGCGGGCGCTGGGGTACAGCG
GCTCGCCCGAGACGCTGGACTCGGCGGTCTCCCCGCGGGGTTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCGGCGAGTGTGGACGACCTCCAGACCGTGGA
CGGGGTCGGGGAGGCGCGGGCGCGGAGCGTGCGGGAGGGGCTCTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6N9VPB8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436