Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA   Type   Regulator
Locus tag   H8S71_RS15600 Genome accession   NZ_CP060417
Coordinates   3039052..3039696 (-) Length   214 a.a.
NCBI ID   WP_003220716.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain ONU 559     
Function   promoting transcription of comS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3034052..3044696
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8S71_RS15565 (H8S71_15560) mrpB 3035244..3035675 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  H8S71_RS15570 (H8S71_15565) mrpC 3035675..3036016 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  H8S71_RS15575 (H8S71_15570) mrpD 3036009..3037490 (+) 1482 WP_169037716.1 Na+/H+ antiporter subunit D -
  H8S71_RS15580 (H8S71_15575) mrpE 3037496..3037972 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  H8S71_RS15585 (H8S71_15580) mrpF 3037972..3038256 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  H8S71_RS15590 (H8S71_15585) mnhG 3038240..3038614 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  H8S71_RS15595 (H8S71_15590) yuxO 3038653..3039033 (-) 381 WP_187002302.1 hotdog fold thioesterase -
  H8S71_RS15600 (H8S71_15595) comA 3039052..3039696 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  H8S71_RS15605 (H8S71_15600) comP 3039777..3042089 (-) 2313 WP_187001885.1 histidine kinase Regulator
  H8S71_RS15610 (H8S71_15605) comX 3042105..3042326 (-) 222 WP_014114983.1 competence pheromone ComX -
  H8S71_RS15615 (H8S71_15610) - 3042323..3043192 (-) 870 WP_169037713.1 polyprenyl synthetase family protein -
  H8S71_RS15620 (H8S71_15615) degQ 3043377..3043517 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  H8S71_RS20570 - 3043739..3043801 (+) 63 Protein_3033 hypothetical protein -
  H8S71_RS15625 (H8S71_15620) - 3043980..3044348 (+) 369 WP_017695529.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 24128.51 Da        Isoelectric Point: 4.6857

>NTDB_id=475913 H8S71_RS15600 WP_003220716.1 3039052..3039696(-) (comA) [Bacillus subtilis subsp. subtilis strain ONU 559]
MKKILVIDDHPAVMEGTKTILETDSNLSVDCLSPEPSEQFIKQHDFSSYDLILMDLNLGGEVNGMELSKQILQENPHCKI
IVYTGYEVEDYFEEAIRAGLHGAISKTESKEKITQYIYHVLNGEILVDFAYFKQLMTQQKTKPAPSSQKEQDVLTPRECL
ILQEVEKGFTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDGVL

Nucleotide


Download         Length: 645 bp        

>NTDB_id=475913 H8S71_RS15600 WP_003220716.1 3039052..3039696(-) (comA) [Bacillus subtilis subsp. subtilis strain ONU 559]
ATGAAAAAGATACTAGTGATTGATGACCATCCGGCTGTCATGGAAGGCACCAAGACAATTTTGGAAACGGATTCGAATTT
GTCTGTTGATTGTCTCAGTCCTGAACCGAGCGAACAGTTTATCAAGCAGCATGATTTCTCGTCATATGATCTCATTTTAA
TGGATCTGAATTTAGGCGGCGAGGTCAATGGGATGGAGCTTTCTAAACAGATTTTACAAGAGAATCCTCATTGTAAAATT
ATCGTGTATACCGGTTATGAGGTCGAGGATTATTTCGAGGAAGCGATTCGTGCGGGTCTGCACGGTGCCATCAGCAAAAC
GGAATCTAAAGAAAAGATCACCCAATACATATACCACGTACTCAACGGAGAAATTTTAGTCGATTTTGCTTACTTTAAAC
AGCTGATGACTCAGCAAAAAACAAAGCCGGCTCCTTCCTCTCAAAAAGAACAAGATGTGCTCACACCTAGAGAATGCCTG
ATTCTTCAAGAAGTTGAAAAGGGATTTACAAACCAAGAAATCGCAGATGCCCTTCATTTAAGCAAGCGGTCCATTGAATA
CAGCTTGACATCGATTTTCAATAAGCTGAATGTCGGTTCACGGACGGAAGCGGTTTTGATTGCGAAATCAGACGGTGTAC
TTTAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, luxR family (GerE)

(152-208)

Response regulator receiver domain (Response_reg)

(4-117)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA Bacillus subtilis subsp. subtilis str. 168

100

100

1