Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   H8S71_RS06030 Genome accession   NZ_CP060417
Coordinates   1172257..1172448 (+) Length   63 a.a.
NCBI ID   WP_072175657.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis strain ONU 559     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1167257..1177448
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H8S71_RS06000 (H8S71_05995) argF 1168122..1169081 (+) 960 WP_187002181.1 ornithine carbamoyltransferase -
  H8S71_RS06005 (H8S71_06000) yjzC 1169167..1169346 (+) 180 WP_003245356.1 YjzC family protein -
  H8S71_RS06010 (H8S71_06005) yjzD 1169392..1169577 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  H8S71_RS06015 (H8S71_06010) - 1169826..1170560 (+) 735 WP_014479433.1 hypothetical protein -
  H8S71_RS06020 (H8S71_06015) - 1170642..1171199 (+) 558 WP_014476424.1 hypothetical protein -
  H8S71_RS06025 (H8S71_06020) med 1171289..1172242 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  H8S71_RS06030 (H8S71_06025) comZ 1172257..1172448 (+) 192 WP_072175657.1 ComG operon transcriptional repressor ComZ Regulator
  H8S71_RS06035 (H8S71_06030) yjzB 1172478..1172705 (-) 228 WP_121591633.1 spore coat protein YjzB -
  H8S71_RS06040 (H8S71_06035) fabH 1172870..1173808 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  H8S71_RS06045 (H8S71_06040) fabF 1173831..1175072 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  H8S71_RS06050 (H8S71_06045) yjaZ 1175148..1175933 (+) 786 WP_021479557.1 DUF2268 domain-containing protein -
  H8S71_RS06055 (H8S71_06050) appD 1176125..1177111 (+) 987 WP_003232965.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7248.29 Da        Isoelectric Point: 4.2564

>NTDB_id=475873 H8S71_RS06030 WP_072175657.1 1172257..1172448(+) (comZ) [Bacillus subtilis subsp. subtilis strain ONU 559]
MQHEKSLEFLQIAMKYFPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=475873 H8S71_RS06030 WP_072175657.1 1172257..1172448(+) (comZ) [Bacillus subtilis subsp. subtilis strain ONU 559]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATTTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTGAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984